MirGeneDB 3.0

MirGeneDB ID

Dsi-Mir-2582-P2

Family name MIR-2582 (all species)
Seed AACUUUG
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-2582b
Paralogues Dsi-Mir-2582-P1 
Orthologues
Node of Origin (locus) D. simulans
Node of Origin (family) D. simulans
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)
X: 3953548-3953605 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2582-P2)
Mir-982-P3 X: 3953288-3953349 [-] UCSC Ensembl
Mir-2582-P2 X: 3953548-3953605 [-] UCSC Ensembl
Mir-982-P2 X: 3953690-3953747 [-] UCSC Ensembl
Mir-2582-P1 X: 3954183-3954240 [-] UCSC Ensembl
Mir-982-P1 X: 3954323-3954388 [-] UCSC Ensembl
Mir-303 X: 3955015-3955071 [-] UCSC Ensembl
Mir-983 X: 3957115-3957173 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAAUAUUACAAAUUAUUACCAUUCAUAUCCUGGAGAGUGUUCUUAAUAGUCUGUUAUUAUUACACAAACUUUGGGAAUACUUUCGAGAUAUGAUGGCAUAACGCUGCAAAAAUAAGUA
Get precursor sequence
Structure
        10            20        30        40        50         
GAAUAUUACAAAUUAUUA----|   U      C G              U   C   UAUU 
                      CCAU CAUAUC U GAGAGUGUUCUUAA AGU UGU    \
                      GGUA GUAUAG A CUUUCAUAAGGGUU UCA ACA    A
AUGAAUAAAAACGUCGCAAUAC^   -      - G              -   A   CAUU 
      110       100         90         80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
He Wh
Star sequence

Dsi-Mir-2582-P2_5p* (predicted)

mirBase accessionMIMAT0012523
Sequence
0- UGGAGAGUGUUCUUAAUAGUCUGU -24
Get sequence
Mature sequence

Dsi-Mir-2582-P2_3p

mirBase accessionMIMAT0012524
Sequence
35- AAACUUUGGGAAUACUUUCGAGA -58
Get sequence