MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-935-v2

Family name MIR-935 (all species)
Seed CAGUUAC
Species Horse (Equus caballus)
MiRBase ID
Paralogues Eca-Mir-935-v1 
Orthologues Bta-Mir-935-v2  Cfa-Mir-935-v2  Cja-Mir-935  Dno-Mir-935-v2  Hsa-Mir-935-v2  Mml-Mir-935-v2  Mmr-Mir-935  Mmu-Mir-935-v2  Ocu-Mir-935-v2  Pab-Mir-935  Rno-Mir-935-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009157.1: 23431175-23431234 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCUCAAGGCCGGCGGGGGCGCGGGCGGCAGUGGCGGGAGCGGCCCCUCGGCCAUCCUCCGUCUGCCCAGUUACCGCUUCCGCUACCGCCGCCGCUCCCGCUCUAGCUCCCGCUCCAGC
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Structure
        10           20        30        40        50         
CUGCUCAAGGCCGGCGG---|  C    G    A             CCC  C   CAUCC 
                    GGG GCGG CGGC GUGGCGGGAGCGG   CU GGC     U
                    CCC CGCC GCCG CAUCGCCUUCGCC   GA CCG     C
CGACCUCGCCCUCGAUCUCG^  U    -    C             AUU  C   UCUGC 
.       110       100         90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-935-v2_5p*
mirBase accessionNone
Sequence 
0- AGUGGCGGGAGCGGCCCCUCGGC -23
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Mature sequence

Eca-Mir-935-v2_3p
mirBase accessionNone
Sequence 
37- CCAGUUACCGCUUCCGCUACCGC -60
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