| MirGeneDB ID | Pab-Mir-935 |
|---|---|
| Family name | MIR-935 (all species) |
| Seed | AGUUACC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-935-v1 Bta-Mir-935-v2 Cfa-Mir-935-v1 Cfa-Mir-935-v2 Cja-Mir-935 Dno-Mir-935-v1 Dno-Mir-935-v2 Eca-Mir-935-v1 Eca-Mir-935-v2 Hsa-Mir-935-v1 Hsa-Mir-935-v2 Mml-Mir-935-v1 Mml-Mir-935-v2 Mmr-Mir-935 Mmu-Mir-935-v1 Mmu-Mir-935-v2 Ocu-Mir-935-v1 Ocu-Mir-935-v2 Rno-Mir-935-v1 Rno-Mir-935-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054699.2: 60352550-60352609 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGCUCAAGGCCGGCGGGGGCGCGGGCGGCAGUGGCGGGAGCGGCCCCUCGGCCAUCCUCCGUCUGCCCAGUUACCGCUUCCGCUACCGCCGCCGCUCCCGCUCUAGCUCCCGCUCCAGCGet precursor sequence |
| Structure | 10 20 30 40 50 CUGCUCAAGGCCGGCGG---| C G A CCC C CCAUCC GGG GCGG CGGC GUGGCGGGAGCGG CU GG U CCC CGCC GCCG CAUCGCCUUCGCC GA CC C CGACCUCGCCCUCGAUCUCG^ U - C AUU C GUCUGC . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-935_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGUGGCGGGAGCGGCCCCUCGG -22
Get sequence
|
| Mature sequence | Pab-Mir-935_3p |
| mirBase accession | None |
| Sequence |
38- CAGUUACCGCUUCCGCUACCGC -60
Get sequence
|
