MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-935-v1

Family name MIR-935 (all species)
Seed AGUUACC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-935
Paralogues Rno-Mir-935-v2 
Orthologues Bta-Mir-935-v1  Cfa-Mir-935-v1  Cja-Mir-935  Dno-Mir-935-v1  Eca-Mir-935-v1  Hsa-Mir-935-v1  Mml-Mir-935-v1  Mmr-Mir-935  Mmu-Mir-935-v1  Ocu-Mir-935-v1  Pab-Mir-935 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr1: 64330562-64330621 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-935-v1)		 Mir-935-v1 chr1: 64330562-64330621 [-] UCSC Ensembl
Mir-935-v2 chr1: 64330562-64330621 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUACUCAAGGCCGGCGGCGGCGCGGGCGGCAGUGGCGGGAGCGGCCCCUCGGCCAUCCUCCGUCUGCCCAGUUACCGCUUCCGCUACCGCCGCCGCUCCCGCUCCAGCUCCCGAGGCUCC
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Structure
        10           20        30        40        50         
CUACUCAAGGCCGGCGGC---| C    G    A             CCC  C  CCAUCC 
                     GG GCGG CGGC GUGGCGGGAGCGG   CU GG      U
                     CC CGCC GCCG CAUCGCCUUCGCC   GA CC      C
CCUCGGAGCCCUCGACCUCGC^ U    -    C             AUU  C  GUCUGC 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Rno-Mir-935-v1_5p*
mirBase accessionNone
Sequence 
0- AGUGGCGGGAGCGGCCCCUCGG -22
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Mature sequence

Rno-Mir-935-v1_3p
mirBase accessionMIMAT0012845
Sequence 
38- CAGUUACCGCUUCCGCUACCGC -60
Get sequence
Proposed targets microrna.org: MIMAT0012845
TargetScanVert: rno-miR-935
miRDB: MIMAT0012845