MirGeneDB 3.0

MirGeneDB ID

Efe-Mir-137-P10

Family name MIR-137 (all species)
Seed AUUGCUU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-137-P4  Efe-Mir-137-P5  Efe-Mir-137-P6  Efe-Mir-137-P7  Efe-Mir-137-P8  Efe-Mir-137-P9 
Orthologues Aga-Mir-137  Agr-Mir-137  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Mgi-Mir-137  Mom-Mir-137  Obi-Mir-137  Ofu-Mir-137  Pau-Mir-137  Pca-Mir-137  Pdu-Mir-137  Pve-Mir-137  Rph-Mir-137  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)
Efet.01.60994: 4905-4965 [+]
Precursor
(pre-Mir +30nt flank)
GAGAUCGGCGCAUUUGAGAUUGAAUUGCUUGCGGGUAUUCCAGAGUCAAUAACAUGACAUGCAAACUGUUAUUGCUUGCGAAUACACGAGAGCAAUCGCAAUACGAUACAGGGACAUCGAU
Get precursor sequence
Structure
        10         20         30        40        50        60
GAGAUCGGCGCAUUUGAG-    A-|     UG  G      CA   U       AUGACA 
                   AUUG  AUUGCU  CG GUAUUC  GAG CAAUAAC      U
                   UAAC  UAACGA  GC CAUAAG  UUC GUUAUUG      G
UAGCUACAGGGACAUAGCA    GC^     GA  A      CG   -       UCAAAC 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Efe-Mir-137-P10_5p*

mirBase accessionNone
Sequence
0- GCGGGUAUUCCAGAGUCAAUAAC -23
Get sequence
Mature sequence

Efe-Mir-137-P10_3p

mirBase accessionNone
Sequence
39- UAUUGCUUGCGAAUACACGAGA -61
Get sequence