MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-2689-P1

Family name MIR-2689 (all species)
Seed AUCCUGG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-2689-P2 
Orthologues Cte-Mir-2689  Pdu-Mir-2689  Snu-Mir-2689 
Node of Origin (locus) E. fetida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(Efe_combined)		 Efet.01.256098: 288-351 [-]
Precursor
(pre-Mir +30nt flank)
UCUUAAGAAUGGAACUGACCUCCCAAGGGCGUGCAAUAGCAGGCCCCGGAUGCGGUGAAGUCAUCGGUGACGUAUCCUGGCCUGCAGUGCACGCCCCCAGAGGGUGCCACUGACACUUCCGGUC
Get precursor sequence
Structure
        10           20        30        40        50        60  
UCUUAAGAAUGGAACUGA---|   CCAA         AUA       CC       GUGAAGU 
                     CCUC    GGGCGUGCA   GCAGGCC  GGAUGCG       C
                     GGAG    CCCGCACGU   CGUCCGG  CCUAUGC       A
CUGGCCUUCACAGUCACCGUG^   ACC-         GA-       U-       AGUGGCU 
  120       110       100         90         80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Star sequence

Efe-Mir-2689-P1_5p*
mirBase accessionNone
Sequence 
0- GUGCAAUAGCAGGCCCCGGAUGCG -24
Get sequence
Mature sequence

Efe-Mir-2689-P1_3p
mirBase accessionNone
Sequence 
42- UAUCCUGGCCUGCAGUGCACGC -64
Get sequence