| MirGeneDB ID | Snu-Mir-2689 |
|---|
| Family name |
MIR-2689 (all species) |
|---|
| Seed |
AUCCUGG |
|---|
| Species |
Peanut worm (Sipunculus nudus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cte-Mir-2689
Efe-Mir-2689-P1
Efe-Mir-2689-P2
Pdu-Mir-2689
|
|---|
| Node of Origin (locus) |
Sipuncula + Pleistoannelida
|
|---|
| Node of Origin (family) |
Sipuncula + Pleistoannelida
|
|---|
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus) |
CM049317.1: 15594051-15594107 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCCUAAUGUCAUCGAGUGCAUGCGGAGCAAGUGUAUUGCAAGCUUGGAUACGUAGACUUGUACCUAUCCUGGCCUGCAAGUGCACCUGACCUGGCAGUGCAAUUCAUCGAAUUCAGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCCUAAUGUCAUCGAGU-- A - AG A -| A U C UAGA
GC UG CGG CA GUGUA UUGCA GCU GGAUA G C
UG AC GUC GU CACGU AACGU CGG CCUAU C U
AGACUUAAGCUACUUAACG - G CA C G^ C U C AUGU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Snu-Mir-2689_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GUGUAUUGCAAGCUUGGAUACG -22
Get sequence
|
|---|
| Mature sequence |
Snu-Mir-2689_3p |
| mirBase accession | None |
|---|
| Sequence |
34- UAUCCUGGCCUGCAAGUGCACCU -57
Get sequence
|
|---|
