MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-8-P6

Family name MIR-8 (all species)
Seed AAUACUG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-8-P4  Efe-Mir-8-P5 
Orthologues Aae-Mir-8  Aga-Mir-8  Agr-Mir-8  Asu-Mir-8  Bge-Mir-8  Bko-Mir-8  Bpl-Mir-8  Cbr-Mir-8  Cel-Mir-8  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dgr-Mir-8  Dlo-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dsi-Mir-8  Dya-Mir-8  Eba-Mir-8  Egr-Mir-8  Esc-Mir-8  Gpa-Mir-8  Gsa-Mir-8  Hme-Mir-8  Hru-Mir-8  Isc-Mir-8  Lan-Mir-8  Lgi-Mir-8  Lhy-Mir-8  Llo-Mir-8  Mgi-Mir-8  Mom-Mir-8  Npo-Mir-8  Obi-Mir-8  Ofu-Mir-8  Ovu-Mir-8  Pau-Mir-8  Pca-Mir-8  Pdu-Mir-8  Pfl-Mir-8  Pmi-Mir-8  Pve-Mir-8  Rph-Mir-8  Sko-Mir-8  Sma-Mir-8  Snu-Mir-8  Spu-Mir-8  Tca-Mir-8  Tur-Mir-8  War-Mir-8 
Node of Origin (locus) E. fetida
Node of Origin (family) Nephrozoa
Genome context
(Efe_combined)		 Efet.01.50405: 2469-2536 [+]
Precursor
(pre-Mir +30nt flank)
NNNNNNNNNNNNNNNNNNNNNCUGUGUGGGCGUCUUACGUGACAGUAUCUAGAUGUCGUUAUCGAUAGAAAUCUCUAAUACUGUCAGGUAAUGAUGACUUCGAAGAUCCGCCAACGCCUAAGCGGACA
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Structure
        10        20          30         40        50        60   
NNNNNNNNNNNNNNNNNNNNN--  G  U  G    -|   G         C    UGUCGUUAU 
                       CU UG GG CGUC UUAC UGACAGUAU UAGA         C
                       GA GC UC GUAG AAUG ACUGUCAUA AUCU         G
ACAGGCGAAUCCGCAACCGCCUA  A  U  A    U^   G         -    CUAAAGAUA 
      120       110       100        90        80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Efe-Mir-8-P6_5p*
mirBase accessionNone
Sequence 
0- CGUCUUACGUGACAGUAUCUAGA -23
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Mature sequence

Efe-Mir-8-P6_3p
mirBase accessionNone
Sequence 
45- UAAUACUGUCAGGUAAUGAUGAC -68
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