MirGeneDB 3.0
MirGeneDB ID

Egr-Mir-92-o134

Family name MIR-92 (all species)
Seed AUUGCAC
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-3479a
Paralogues Egr-Mir-92-o135 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) E. granulosus
Node of Origin (family) Bilateria
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000006.1: 1737374-1737428 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-92-o134)		 Mir-92-o134 APAU02000006.1: 1737374-1737428 [-] UCSC Ensembl
Mir-7-P17 APAU02000006.1: 1743289-1743385 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCAUCGCUCGAUUGGUCUCUGUUGCACAACGGUGAAAGUUUAUGCAUUUACAUCGGUUGAUGUAUUGCACGUUCUUUCGCCAUCUUGCAGCAGAUUUGGCUCCGUGUGAUAAGU
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Structure
        10          20        30        40        50       
UUCAUCGCUCGAUUGGUC--|        CAAC        UUUA    UUUACAUCG 
                    UCUGUUGCA    GGUGAAAG    UGCA         \
                    AGACGACGU    CCGCUUUC    ACGU         G
UGAAUAGUGUGCCUCGGUUU^        UCUA        UUGC    UAUGUAGUU 
   110       100        90        80        70        60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Star sequence

Egr-Mir-92-o134_5p*
mirBase accessionMIMAT0041183
Sequence 
0- CGGUGAAAGUUUAUGCAUUUA -21
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Mature sequence

Egr-Mir-92-o134_3p
mirBase accessionMIMAT0041184
Sequence 
33- UAUUGCACGUUCUUUCGCCAUC -55
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