| MirGeneDB ID | Esc-Mir-12498 |
|---|
| Family name |
MIR-12498 (all species) |
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| Seed |
GGGGAUG |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Npo-Mir-12498
Obi-Mir-12498
Ovu-Mir-12498
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-1_pre_SRIE01008808.1:1274484-1274624: 41-101 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AACCAAUAUACUGAUUUCCGUUUUAGGAAGUGCCCUUCACAGGUAUCUCCUGGUUUAAUAUGAUGCCCUGGGGAUGCUGUGAAUGGUUAUUUCCUGGAACGGUCGCUAACACCUUUGAUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AACCAAUAUACUGAUUU-- -| C G U- UUUAA
CCGUUUUAGGAAGU GCC UUCACAG UAUCUCC GG U
GGCAAGGUCCUUUA UGG AAGUGUC GUAGGGG CC A
UAUAGUUUCCACAAUCGCU U^ U - UC GUAGU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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| Star sequence |
Esc-Mir-12498_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- UGCCCUUCACAGGUAUCUCCUGG -23
Get sequence
|
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| Mature sequence |
Esc-Mir-12498_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UGGGGAUGCUGUGAAUGGUUAUU -61
Get sequence
|
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