MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12498

Family name MIR-12498 (all species)
Seed GGGGAUG
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12498  Npo-Mir-12498  Ovu-Mir-12498 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(PRJNA270931_OBI)
KQ417540: 703817-703877 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCAAGGGAUCUACAACACUUGGCUAGAUAAUGCCCUUCACAGGUAUCUCCUGGAUAUGAACUGAAACCUGGGGAUGCUGUGAAUGGUUCUUACCUGGCCAGGAUUACGUCGAAAGGGUUUA
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Structure
        10          20        30         40        50          
UCAAGGGAUCUACAACA--         A   U-|  C       G       U  AUAUGA 
                   CUUGGCUAG UAA  GCC UUCACAG UAUCUCC GG      \
                   GGACCGGUC AUU  UGG AAGUGUC GUAGGGG CC      A
AUUUGGGAAAGCUGCAUUA         C   CU^  U       -       U  AAAGUC 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Obi-Mir-12498_5p*

mirBase accessionNone
Sequence
0- UGCCCUUCACAGGUAUCUCCUGG -23
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Mature sequence

Obi-Mir-12498_3p

mirBase accessionNone
Sequence
38- UGGGGAUGCUGUGAAUGGUUCUU -61
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