MirGeneDB 3.0

MirGeneDB ID

Ovu-Mir-12498

Family name MIR-12498 (all species)
Seed GGGGAUG
Species Common octopus (Octopus vulgaris)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12498  Npo-Mir-12498  Obi-Mir-12498 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(GCA_003957725.1_ASM395772v1_OVU)
RXHP01016389.1: 512059-512119 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGGGAUCUACAGACACUUGACUAGGUAAUGCCCUUCACAGGUAUCUCCUGGAUUUGAACUGAAACCUGGGGAUGCUGUGAAUGGUUCUUACCUGGUUAGGAUUACGUCGAAACUGUUUA
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Structure
        10          20        30         40        50          
CAAGGGAUCUACAGACA--             U-|  C       G       U  AUUUGA 
                   CUUGACUAGGUAA  GCC UUCACAG UAUCUCC GG      \
                   GGAUUGGUCCAUU  UGG AAGUGUC GUAGGGG CC      A
AUUUGUCAAAGCUGCAUUA             CU^  U       -       U  AAAGUC 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ax Ce Fr He In Op Op Pe Po Re Sk St Su Su Te Ve Vi Wh
Star sequence

Ovu-Mir-12498_5p*

mirBase accessionNone
Sequence
0- UGCCCUUCACAGGUAUCUCCUGG -23
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Mature sequence

Ovu-Mir-12498_3p

mirBase accessionNone
Sequence
38- UGGGGAUGCUGUGAAUGGUUCUU -61
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