MirGeneDB ID | Npo-Mir-12498 |
---|---|
Family name | MIR-12498 (all species) |
Seed | GGGGAUG |
Species | Chambered Nautilus (Nautilus pompilius) |
MiRBase ID | |
Paralogues | |
Orthologues | Esc-Mir-12498 Obi-Mir-12498 Ovu-Mir-12498 |
Node of Origin (locus) | Cephalopoda |
Node of Origin (family) | Cephalopoda |
Genome context (GCA_018389105_NPO) |
JACATO010000106.1: 248968-249029 [-] Ensembl |
Precursor (pre-Mir +30nt flank) | CCACCCUGCUCAUACCUCUGCACCCGGUUUUGCCCUUCACAGGUAUCUCCUGGAUAGAGACUUGGACCCUGGGGAUGCUGUGAAUGGUUCUUACCGGGAGUAGUCUCUUGUCGGACACAGGAGet precursor sequence |
Structure | 10 20 30 40 50 60 CCACCCUGCUCAUACCU-- A UUU-| C G U AUAGAG CUGC CCCGGU GCC UUCACAG UAUCUCC GG A GAUG GGGCCA UGG AAGUGUC GUAGGGG CC C AGGACACAGGCUGUUCUCU A UUCU^ U - U CAGGUU 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Star sequence | Npo-Mir-12498_5p* (predicted) |
mirBase accession | None |
Sequence |
0- UGCCCUUCACAGGUAUCUCCUGG -23
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|
Mature sequence | Npo-Mir-12498_3p (predicted) |
mirBase accession | None |
Sequence |
39- UGGGGAUGCUGUGAAUGGUUCUU -62
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