MirGeneDB 3.0

MirGeneDB ID

Esc-Mir-12509

Family name MIR-12509 (all species)
Seed UUGGCAU
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues Npo-Mir-12509  Obi-Mir-12509  Ovu-Mir-12509 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(GCA_004765925.1_miRNA_LOCI)
Esc-Novel-12_pre_SRIE01012209.1:245987-246131: 45-101 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
ACUACAGAAGAUACCCGGCUGGAAGGUGUGUUUGGCAUGGCAACCGCUUUGUGUCUACGUCAUCACUAGUCGUUGACAUGCGCAACACGUACUCCCAGACAUUGUACAUCGUGUUUC
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Structure
        10         20         30         40        50        
ACUACAGAAGAUACCCGG-    A  GU-|    U -     G    C   UU  GUCUA 
                   CUGG AG   GUGUU G GCAUG CAAC GCU  GU     C
                   GACC UC   CACAA C CGUAC GUUG UGA  CA     G
CUUUGUGCUACAUGUUACA    C  AUG^    - G     A    C   U-  CUACU 
     110       100        90         80        70         60
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
 +
Li
Mature sequence

Esc-Mir-12509_5p

mirBase accessionNone
Sequence
0- UUUGGCAUGGCAACCGCUUUGU -22
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Star sequence

Esc-Mir-12509_3p*

mirBase accessionNone
Sequence
35- CUAGUCGUUGACAUGCGCAACA -57
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