| MirGeneDB ID | Obi-Mir-12509 |
|---|
| Family name |
MIR-12509 (all species) |
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| Seed |
UUGGCAU |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Esc-Mir-12509
Npo-Mir-12509
Ovu-Mir-12509
|
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| Node of Origin (locus) |
Cephalopoda
|
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| Node of Origin (family) |
Cephalopoda
|
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Genome context
(PRJNA270931_OBI) |
KQ416270: 137472-137529 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGGUUAUUGACAAACAGCUUGCGUGUAUGUUUGGCAUGGCAACCGCUUUGUGUAUAAGGCAUCACUAGUCGUUGACAUGCGCAAUACGUACGCGUAGACAUCGUACAGCCGAGCAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GUGGUUAUUGACAAACAGC- - -| G C UU GUAUA
UUGCGUGUAUGU UUG GCAUG CAAC GCU GU A
GAUGCGCAUGCA AAC CGUAC GUUG UGA CA G
UAACGAGCCGACAUGCUACA U G^ A C U- CUACG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12509_5p |
| mirBase accession | None |
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| Sequence |
0- UUUGGCAUGGCAACCGCUUUGU -22
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12509_3p* |
| mirBase accession | None |
|---|
| Sequence |
35- CUAGUCGUUGACAUGCGCAAUAC -58
Get sequence
|
|---|
