MirGeneDB 3.0

MirGeneDB ID

Obi-Mir-12509

Family name MIR-12509 (all species)
Seed UUGGCAU
Species California two-spot octopus (Octopus bimaculoides)
MiRBase ID
Paralogues
Orthologues Esc-Mir-12509  Npo-Mir-12509  Ovu-Mir-12509 
Node of Origin (locus) Cephalopoda
Node of Origin (family) Cephalopoda
Genome context
(PRJNA270931_OBI)
KQ416270: 137472-137529 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGUUAUUGACAAACAGCUUGCGUGUAUGUUUGGCAUGGCAACCGCUUUGUGUAUAAGGCAUCACUAGUCGUUGACAUGCGCAAUACGUACGCGUAGACAUCGUACAGCCGAGCAAU
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Structure
        10         20        30          40        50        
GUGGUUAUUGACAAACAGC-            -   -|    G    C   UU  GUAUA 
                    UUGCGUGUAUGU UUG GCAUG CAAC GCU  GU     A
                    GAUGCGCAUGCA AAC CGUAC GUUG UGA  CA     G
UAACGAGCCGACAUGCUACA            U   G^    A    C   U-  CUACG 
      110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Obi-Mir-12509_5p

mirBase accessionNone
Sequence
0- UUUGGCAUGGCAACCGCUUUGU -22
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Star sequence

Obi-Mir-12509_3p*

mirBase accessionNone
Sequence
35- CUAGUCGUUGACAUGCGCAAUAC -58
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