| MirGeneDB ID | Npo-Mir-12509 |
|---|---|
| Family name | MIR-12509 (all species) |
| Seed | UUGGCAU |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Esc-Mir-12509 Obi-Mir-12509 Ovu-Mir-12509 |
| Node of Origin (locus) | Cephalopoda |
| Node of Origin (family) | Cephalopoda |
| Genome context (GCA_018389105_NPO) |
JACATO010000392.1: 79417-79473 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | CUUGGAGUGAGCAUCAUGUUUGCUUGCACUUUUGGCAUGACAACCGCUUUGUGUGGAACUCAUCACCAGCCGUUAUCAUGUUGAUUGCAUGCACCCAGACACCACCAGCUAGAAGCGGet precursor sequence |
| Structure | 10 20 30 40 50 CUUGGAGUGAGCAUCAU----|UU U CUU UG C C UU GUGGA G UGC UGCA U GCAUGA AAC GCU GU A C ACG ACGU A UGUACU UUG CGA CA C GCGAAGAUCGACCACCACAGA^CC U U-- GU A C C- CUACU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
| Mature sequence | Npo-Mir-12509_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UUUGGCAUGACAACCGCUUUGU -22
Get sequence
|
| Star sequence | Npo-Mir-12509_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- CCAGCCGUUAUCAUGUUGAUUG -57
Get sequence
|
