MirGeneDB 3.0
MirGeneDB ID

Hmi-Mir-10-P1a

Family name MIR-10 (all species)
Seed ACCCUGU
Species Panther worm (Hofstenia miamia)
MiRBase ID
Paralogues Hmi-Mir-10-P1b 
Orthologues Aae-Mir-10-P1-v1  Aae-Mir-10-P1-v2  Adi-Mir-10  Aga-Mir-10-P1-v1  Aga-Mir-10-P1-v2  Agr-Mir-10-P1  Asp-Mir-10  Asu-Mir-10-P1  Bfl-Mir-10-P1-v1  Bfl-Mir-10-P1-v2  Bge-Mir-10-P1-v1  Bge-Mir-10-P1-v2  Bla-Mir-10-P1-v1  Bla-Mir-10-P1-v2  Cbr-Mir-10-P1  Cel-Mir-10-P1  Cte-Mir-10-P1  Dan-Mir-10-P1  Dgr-Mir-10-P1  Dlo-Mir-10-P1-v1  Dlo-Mir-10-P1-v2  Dma-Mir-10-P1-v1  Dma-Mir-10-P1-v2  Dme-Mir-10-P1  Dmo-Mir-10-P1  Dpu-Mir-10-P1-v1  Dpu-Mir-10-P1-v2  Dsi-Mir-10-P1  Dya-Mir-10-P1  Eba-Mir-10-P1  Efe-Mir-10-P1  Egr-Mir-10-P1  Gpa-Mir-10-P1  Gsp-Mir-10-P1  Hme-Mir-10-P1-v1  Hme-Mir-10-P1-v2  Hru-Mir-10-P1  Isc-Mir-10-P1-v1  Isc-Mir-10-P1-v2  Lgi-Mir-10-P1  Lhy-Mir-10-P1  Llo-Mir-10-P1  Mgi-Mir-10-P1  Mom-Mir-10-P1  Npo-Mir-10-P1  Nve-Mir-10  Ofu-Mir-10-P1  Pau-Mir-10-P1  Pca-Mir-10-P1  Pdu-Mir-10-P1  Pfl-Mir-10-P1  Pmi-Mir-10-P1  Pve-Mir-10-P1  Rph-Mir-10-P1  Sko-Mir-10-P1  Sma-Mir-10-P1  Snu-Mir-10-P1  Spu-Mir-10-P1  Tca-Mir-10-P1-v1  Tca-Mir-10-P1-v2  War-Mir-10-P1  Xbo-Mir-10-P1 
Node of Origin (locus) H. miamia
Node of Origin (family) Eumetazoa
Genome context
(Hofstenia_miamia.HmiaM1.dna.nonchromosomal)		 SCFE01000023.1: 368904-368959 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUACACAAUGUAAAAGCGGCUGUGUGUCAUACCCUGUAUUUCCGAAGGUUUUCGAAAGUUGAACACCUUUGAUUUGCAGGGCGCAUGCAACUCAGCCCCCGUAUCUUCAAAAUCA
Get precursor sequence
Structure
        10        20        30          40        50        
UCUACACAAUGUAAAAGC     U  GU   A--|      UU  C      U  CGAA 
                  GGCUG GU  CAU   CCCUGUA  UC GAAGGU UU    \
                  CCGAC CA  GUA   GGGACGU  AG UUUCCA AA    A
ACUAAAACUUCUAUGCCC     U  AC   CGC^      UU  -      C  GUUG 
    110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ho Ho
Mature sequence

Hmi-Mir-10-P1a_5p
mirBase accessionNone
Sequence 
0- UACCCUGUAUUUCCGAAGGUUUU -23
Get sequence
Star sequence

Hmi-Mir-10-P1a_3p* (predicted)
mirBase accessionNone
Sequence 
34- CACCUUUGAUUUGCAGGGCGCA -56
Get sequence