MirGeneDB ID | Hsa-Mir-1270 |
Family name |
MIR-1270 (all species) |
Seed |
UGGAGAU |
Species |
Human (Homo sapiens) |
MiRBase ID |
hsa-mir-1270
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
H. sapiens
|
Node of Origin (family) |
H. sapiens
|
Genome context (hg38) |
chr19: 20399284-20399342 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUAAUUUACUUUUAAAGGCACAGAGUUAUACUGGAGAUAUGGAAGAGCUGUGUUGGGUAUAAGUAACAGGCUUUUCUUUAUCUUCUAUGUGGCUCUUUGCAUUGUGCUCACCUGGGACC
Get precursor sequence
|
Structure | 10 20 30 40 50
AUAAUUUACUUUUAAAG-- C CU U -| GUUGGG
GCA AGAGUUAUA GGAGAUA GGAAGAG CUGU U
CGU UCUCGGUGU CUUCUAU UCUUUUC GACA A
CCAGGGUCCACUCGUGUUA U AU U G^ AUGAAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
1- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
2- |
3- |
3- |
3- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
4- |
5- |
5- |
5- |
5- |
5- |
5- |
5- |
6- |
6- |
6- |
6- |
6- |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Hsa-Mir-1270_5p |
mirBase accession | MIMAT0005924 |
Sequence |
0- CUGGAGAUAUGGAAGAGCUGUGU -23
Get sequence
|
Star sequence |
Hsa-Mir-1270_3p* |
mirBase accession | None |
Sequence |
36- CAGGCUUUUCUUUAUCUUCUAUG -59
Get sequence
|