| MirGeneDB ID | Hsa-Mir-1270 |
|---|
| Family name |
MIR-1270 (all species) |
|---|
| Seed |
UGGAGAU |
|---|
| Species |
Human (Homo sapiens) |
|---|
| MiRBase ID |
hsa-mir-1270
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cja-Mir-1270
Mml-Mir-1270
Pab-Mir-1270
|
|---|
| Node of Origin (locus) |
Simiiformes
|
|---|
| Node of Origin (family) |
Simiiformes
|
|---|
Genome context
(hg38) |
chr19: 20399284-20399342 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUAAUUUACUUUUAAAGGCACAGAGUUAUACUGGAGAUAUGGAAGAGCUGUGUUGGGUAUAAGUAACAGGCUUUUCUUUAUCUUCUAUGUGGCUCUUUGCAUUGUGCUCACCUGGGACC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUAAUUUACUUUUAAAG-- C CU U -| GUUGGG
GCA AGAGUUAUA GGAGAUA GGAAGAG CUGU U
CGU UCUCGGUGU CUUCUAU UCUUUUC GACA A
CCAGGGUCCACUCGUGUUA U AU U G^ AUGAAU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | The 3' end of the 5p arm might be monouridylated. |
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Dc |
Dc |
Dr |
Dr |
Xp |
Xp |
Bl |
Br |
Br |
Ce |
Ce |
Co |
Fo |
He |
Ki |
Le |
Li |
Li |
Lu |
Pa |
Pl |
Pl |
Sk |
Sk |
Sk |
Sm |
Sp |
Sp |
St |
Te |
Th |
Ut |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Hsa-Mir-1270_5p |
| mirBase accession | MIMAT0005924 |
|---|
| Sequence |
0- CUGGAGAUAUGGAAGAGCUGUG -22
Get sequence
|
|---|
| Star sequence |
Hsa-Mir-1270_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CAGGCUUUUCUUUAUCUUCUAUG -59
Get sequence
|
|---|
