MirGeneDB ID | Mml-Mir-1270 |
---|---|
Family name | MIR-1270 (all species) |
Seed | UGGAGAG |
Species | Rhesus monkey (Macaca mulatta) |
MiRBase ID | |
Paralogues | |
Orthologues | Cja-Mir-1270 Hsa-Mir-1270 Pab-Mir-1270 |
Node of Origin (locus) | Simiiformes |
Node of Origin (family) | Simiiformes |
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014354.1: 19859561-19859619 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | GGAAUUUACUUUUAAAGGCAUAAUGUUAUACUGGAGAGCAGGAAGAGCUGUGUUGGGUAUAAGUAACAGGCUUUUCUUUAUCUUCUAUGUGACUCUUUGCAUUGUGCUCGCCUGGGGCCGet precursor sequence |
Structure | 10 20 30 40 50 GGAAUUUACUUUUAAAG-- UAAU CU GC -| GUUGGG GCA GUUAUA GGAGA AGGAAGAG CUGU U CGU CAGUGU CUUCU UUCUUUUC GACA A CCGGGGUCCGCUCGUGUUA UUCU AU AU G^ AUGAAU 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | No |
Mature sequence | Mml-Mir-1270_5p (predicted) |
mirBase accession | None |
Sequence |
0- CUGGAGAGCAGGAAGAGCUGUG -22
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|
Star sequence | Mml-Mir-1270_3p* (predicted) |
mirBase accession | None |
Sequence |
36- CAGGCUUUUCUUUAUCUUCUAUG -59
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|