Mir-3085

MirGeneDB ID

Hsa-Mir-3085

Family name

MIR-3085 (all species)

Seed

CUGGCUG

Species

Human (Homo sapiens)

MiRBase ID

Paralogues

Orthologues

Bta-Mir-3085 Cfa-Mir-3085 Cja-Mir-3085 Cpo-Mir-3085 Dno-Mir-3085 Ete-Mir-3085 Laf-Mir-3085 Mml-Mir-3085 Mmr-Mir-3085 Mmu-Mir-3085 Ocu-Mir-3085 Pab-Mir-3085 Rno-Mir-3085

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chr10: 97875824-97875884 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AUCUACACGGUUGCCAACCCUACUCUGGGAAGGUGCCAUUCUGAGGGCCAGGAGUUUGAUUAUGUGUCACUCUGGCUGCUAUGGCCCCCUCCCAGGGUCUGGGUAUCACACCCAGGCCAGU

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Structure

        10         20         30        40        50        60  
AUCUACACGGUUGCCAA-   U-|        A  U     UCUGAG      G   UUGAUU 
                  CCC  ACUCUGGGA GG GCCAU      GGCCAG AGU      \
                  GGG  UGGGACCCU CC CGGUA      UCGGUC UCA      A
UGACCGGACCCACACUAU   UC^        C  C     UCG---      -   CUGUGU 
 .       110       100        90        80            70

Deep sequencing

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Comment

This gene is annotated on Ensembl (assembly GRCh38.p2) as gene AL139239.1.

3' NTU

Yes

Motifs

CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-3085_5p*

mirBase accession

None

Sequence

0- AGGUGCCAUUCUGAGGGCCAGGAGU -25

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Mature sequence

Hsa-Mir-3085_3p

mirBase accession

None

Sequence

40- UCUGGCUGCUAUGGCCCCCUC -61

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