MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-3085

Family name MIR-3085 (all species)
Seed CUGGCUG
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-3085  Cfa-Mir-3085  Cja-Mir-3085  Cpo-Mir-3085  Dno-Mir-3085  Ete-Mir-3085  Hsa-Mir-3085  Laf-Mir-3085  Mml-Mir-3085  Mmu-Mir-3085  Ocu-Mir-3085  Pab-Mir-3085  Rno-Mir-3085 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007675.1: 48158912-48158972 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUACGCAGUCACCAGCCCUGCUCUGGGAAGGUGCCAUUCUGAGGGCCAGGAGUUUGAUUACGUGUCACUCUGGCUGCUAUGGCCCCCUCCUAGGGUCCGGGCGUCACACCCAGACCAGU
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Structure
        10         20         30        40        50        60  
AUCUACGCAGUCACCAG-   U-|        A  U     UCUGAG      G  UUUGAUU 
                  CCC  GCUCUGGGA GG GCCAU      GGCCAG AG       \
                  GGG  UGGGAUCCU CC CGGUA      UCGGUC UC       A
UGACCAGACCCACACUGC   CC^        C  C     UCG---      -  ACUGUGC 
 .       110       100        90        80            70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-3085_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGUGCCAUUCUGAGGGCCAGGAG -24
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Mature sequence

Mmr-Mir-3085_3p (predicted)

mirBase accessionNone
Sequence
40- UCUGGCUGCUAUGGCCCCCUC -61
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