| MirGeneDB ID | Laf-Mir-142-P1-v4 |
|---|---|
| Family name | MIR-142 (all species) |
| Seed | CCAUAAA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-142-P1-v1 Laf-Mir-142-P1-v2 Laf-Mir-142-P1-v3 |
| Orthologues | |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010058.1: 10514760-10514822 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | ACGCAGAUGGACAGACAGACAGUGCAGUCACCCAUAAAGUAGAAAGCACUACUAACAGCACUGGAGGGUGUAGUGUUUCCUACUUUAUGGAUGAGUGUACUGUGGGCUUCGGAGACCACGCCAGet precursor sequence |
| Structure | 10 20 30 40 50 60 ACGCAGAUGGACAGACAG--| G C A UAACAGCA ACAGUGCA UCA CCAUAAAGUAG AAGCACUAC \ UGUCAUGU AGU GGUAUUUCAUC UUUGUGAUG C ACCGCACCAGAGGCUUCGGG^ G A C UGGGAGGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Laf-Mir-142-P1-v4_5p |
| mirBase accession | None |
| Sequence |
0- CCCAUAAAGUAGAAAGCACUAC -22
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|
| Star sequence | Laf-Mir-142-P1-v4_3p* |
| mirBase accession | None |
| Sequence |
41- AGUGUUUCCUACUUUAUGGAUG -63
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|
