MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-142-P1-v1

Family name MIR-142 (all species)
Seed AUAAAGU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-142-P1-v2  Laf-Mir-142-P1-v3  Laf-Mir-142-P1-v4 
Orthologues
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010058.1: 10514762-10514820 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGAUGGACAGACAGACAGUGCAGUCACCCAUAAAGUAGAAAGCACUACUAACAGCACUGGAGGGUGUAGUGUUUCCUACUUUAUGGAUGAGUGUACUGUGGGCUUCGGAGACCACGC
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Structure
        10          20        30        40        50         
GCAGAUGGACAGACAGA--|      G   C           A         UAACAGCA 
                   CAGUGCA UCA CCAUAAAGUAG AAGCACUAC        \
                   GUCAUGU AGU GGUAUUUCAUC UUUGUGAUG        C
CGCACCAGAGGCUUCGGGU^      G   A           C         UGGGAGGU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-142-P1-v1_5p
mirBase accessionNone
Sequence 
0- CAUAAAGUAGAAAGCACUACU -21
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Star sequence

Laf-Mir-142-P1-v1_3p*
mirBase accessionNone
Sequence 
38- UAGUGUUUCCUACUUUAUGGA -59
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