| MirGeneDB ID | Laf-Mir-362-P1 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | GUGCACC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-362-P2 Laf-Mir-362-P4 Laf-Mir-362-P6 |
| Orthologues | Bta-Mir-362-P1-v1 Bta-Mir-362-P1-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010083.1: 349059-349115 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCGAGCCUUCUGCCCUGCUCCCCUUCUCUGAUCCUUAGUACCCAGAUGCAGCUGCCAUCUCAGUGCAGUGCACCUGGACAAGGAUUCAAAGAGGGUGAGUGUCUUCUGCACAGAGAAGet precursor sequence |
| Structure | 10 20 30 40 50 CCGAGCCUUCUGCCCUG- C C -| A AC A G CAUC CUC CCUUCU UG AUCCUU GU CCAG UGCA CUGC \ GAG GGGAGA AC UAGGAA CA GGUC ACGU GACG U AAGAGACACGUCUUCUGU U A U^ - -- C - UGAC 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-362-P1_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AUCCUUAGUACCCAGAUGCAGCUGC -25
Get sequence
|
| Mature sequence | Laf-Mir-362-P1_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- AGUGCACCUGGACAAGGAUUC -57
Get sequence
|
