| MirGeneDB ID | Laf-Mir-362-P4 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AUCCUUG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-362-P1 Laf-Mir-362-P2 Laf-Mir-362-P6 |
| Orthologues | Bta-Mir-362-P4 Cfa-Mir-362-P4 Cja-Mir-362-P4 Cpo-Mir-362-P4 Dno-Mir-362-P4 Eca-Mir-362-P4 Ete-Mir-362-P4 Hsa-Mir-362-P4 Mml-Mir-362-P4 Mmr-Mir-362-P4 Mmu-Mir-362-P4 Ocu-Mir-362-P4 Pab-Mir-362-P4 Rno-Mir-362-P4 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010083.1: 323100-323158 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCUGAGCCUUCUUGUUUGCACCCCCUCUCUAAUCCUUGGAACCUAGGUGUGAGUGAUGUUUCAGUGCAACACACCUGUUCAAGGAUUCAAAGAGGCUGAGCCUUGUCUGCAUGUAUAAGGet precursor sequence |
| Structure | 10 20 30 40 50 60 UCUGAGCCUUCUUGUUU- ACCC CU-| ACC AG AUGUU GC CCUCU AAUCCUUGGA UAGGUGUG UG \ CG GGAGA UUAGGAACUU GUCCACAC AC U GAAUAUGUACGUCUGUUC AGUC AAC^ --- A- GUGAC 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-362-P4_5p |
| mirBase accession | None |
| Sequence |
0- AAUCCUUGGAACCUAGGUGUGAGUG -25
Get sequence
|
| Star sequence | Laf-Mir-362-P4_3p* (predicted) |
| mirBase accession | None |
| Sequence |
37- AACACACCUGUUCAAGGAUUCA -59
Get sequence
|
