MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-362-P4

Family name MIR-362 (all species)
Seed ACACACC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-362
Paralogues Cpo-Mir-362-P3b  Cpo-Mir-362-P5  Cpo-Mir-362-P6 
Orthologues Bta-Mir-362-P4  Cfa-Mir-362-P4  Cja-Mir-362-P4  Dno-Mir-362-P4  Eca-Mir-362-P4  Ete-Mir-362-P4  Hsa-Mir-362-P4  Laf-Mir-362-P4  Mml-Mir-362-P4  Mmr-Mir-362-P4  Mmu-Mir-362-P4  Ocu-Mir-362-P4  Pab-Mir-362-P4  Rno-Mir-362-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_132: 3009085-3009144 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-362-P4)		 Mir-188-P1 scaffold_132: 3003104-3003162 [+] UCSC
Mir-188-P2 scaffold_132: 3003465-3003524 [+] UCSC
Mir-362-P4 scaffold_132: 3009085-3009144 [+] UCSC
Mir-362-P5 scaffold_132: 3009773-3009832 [+] UCSC
Mir-362-P3b scaffold_132: 3010278-3010339 [+] UCSC
Mir-188-P3 scaffold_132: 3012570-3012628 [+] UCSC
Mir-362-P6 scaffold_132: 3014248-3014306 [+] UCSC
Precursor
(pre-Mir +30nt flank)
AUACUUGAGCCUUAUCUGUUCUUCCUCUCAAAUCCUUGGGAACCUAGGUGUGAGUGCUGCUUCAGUGCAACACACCUAUUCAAGGAUUCAAAGAGGCUGAGCCUUGUCUGCAUGUCGAAG
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Structure
        10         20        30         40        50         60 
AUACUUGAGCCUUAUCU-    UU     CA-|         AACC        A-  GCUGC 
                  GUUC  CCUCU   AAUCCUUGGG    UAGGUGUG  GU     \
                  CGAG  GGAGA   UUAGGAACUU    AUCCACAC  CG     U
GAAGCUGUACGUCUGUUC    UC     AAC^         ----        AA  UGACU 
.       110       100        90        80            70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-362-P4_5p*
mirBase accessionMIMAT0047190
Sequence 
0- AAUCCUUGGGAACCUAGGUGUGAGU -25
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Mature sequence

Cpo-Mir-362-P4_3p
mirBase accessionMIMAT0047191
Sequence 
38- AACACACCUAUUCAAGGAUUCA -60
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