MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-362-P4

Family name MIR-362 (all species)
Seed AUGCACC
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-502
Paralogues Mml-Mir-362-P1  Mml-Mir-362-P2-v1  Mml-Mir-362-P2-v2  Mml-Mir-362-P3  Mml-Mir-362-P5 
Orthologues Bta-Mir-362-P4  Cfa-Mir-362-P4  Cpo-Mir-362-P4  Dno-Mir-362-P4  Ete-Mir-362-P4  Hsa-Mir-362-P4  Mmu-Mir-362-P4  Ocu-Mir-362-P4  Rno-Mir-362-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rheMac8_trace)
chrX: 50021934-50021993 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P4)
Mir-188-P2 chrX: 50008239-50008297 [+] UCSC Ensembl
Mir-188-P1 chrX: 50008592-50008651 [+] UCSC Ensembl
Mir-362-P2-v1 chrX: 50013506-50013567 [+] UCSC Ensembl
Mir-362-P2-v2 chrX: 50013506-50013567 [+] UCSC Ensembl
Mir-362-P1 chrX: 50014029-50014087 [+] UCSC Ensembl
Mir-362-P5 chrX: 50017286-50017346 [+] UCSC Ensembl
Mir-362-P3 chrX: 50018014-50018073 [+] UCSC Ensembl
Mir-188-P3 chrX: 50020582-50020640 [+] UCSC Ensembl
Mir-362-P4 chrX: 50021934-50021993 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAAGCCUUCUGCCCUGUUCUCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGUCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGGGAGCUCAACUGUACCAAGAAGGA
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Structure
        10          20        30         40        50        60 
CCCAAGCCUUCUGCCCU--             -|        UAU UG     UAG   UGUC 
                   GUUCUCCCUCUCU AAUCCUUGC   C  GGUGC   UGC    \
                   CGAGGGGGAGAGA UUAGGAACG   G  CCACG   ACG    U
AGGAAGAACCAUGUCAACU             C^        --- GU     UA-   UAAC 
.       110       100        90        80           70
Deep sequencing
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CommentThere is a second Drosha and Dicer cut -1 and +1 respectively to what is annotated here.
3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-362-P4_5p*

mirBase accessionMIMAT0006365
Sequence
0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26
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Proposed targets TargetScanVert: mml-miR-502-5p
Mature sequence

Mml-Mir-362-P4_3p

mirBase accessionMIMAT0006366
Sequence
37- AAUGCACCUGGGCAAGGAUUCAG -60
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Proposed targets TargetScanVert: mml-miR-502-3p