Mir-362-P4

MirGeneDB ID

Mml-Mir-362-P4

Family name

MIR-362 (all species)

Seed

AUCCUUG

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-362

Paralogues

Mml-Mir-362-P3a-v1 Mml-Mir-362-P3a-v2 Mml-Mir-362-P3b Mml-Mir-362-P5 Mml-Mir-362-P6

Orthologues

Bta-Mir-362-P4 Cfa-Mir-362-P4 Cja-Mir-362-P4 Cpo-Mir-362-P4 Dno-Mir-362-P4 Eca-Mir-362-P4 Ete-Mir-362-P4 Hsa-Mir-362-P4 Laf-Mir-362-P4 Mmr-Mir-362-P4 Mmu-Mir-362-P4 Ocu-Mir-362-P4 Pab-Mir-362-P4 Rno-Mir-362-P4

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014356.1: 49797871-49797929 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P4)

Mir-188-P1 CM014356.1: 49792095-49792153 [+] UCSC Ensembl
Mir-188-P2 CM014356.1: 49792448-49792507 [+] UCSC Ensembl
Mir-362-P3a-v1 CM014356.1: 49797348-49797409 [+] UCSC Ensembl
Mir-362-P3a-v2 CM014356.1: 49797348-49797409 [+] UCSC Ensembl
Mir-362-P4 CM014356.1: 49797871-49797929 [+] UCSC Ensembl
Mir-362-P3b CM014356.1: 49801117-49801177 [+] UCSC Ensembl
Mir-188-P3 CM014356.1: 49803687-49803745 [+] UCSC Ensembl
Mir-362-P6 CM014356.1: 49805039-49805098 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCAGAGCCUUCUUGUCUGCUCCCCCUCUCGAAUCCUUGGAACCUAGGUGUGAGUGCUAUUUCAGUGCAACACACCUAUUCAAGGAUUCAAAGAGGCUGAGCCUUGUCUGCAUGUAGAAG

Get precursor sequence

Structure

        10         20         30        40        50        60 
CCAGAGCCUUCUUGUCU-    CC     C-|          ACC        AG   UAUU 
                  GCUC  CCUCU  GAAUCCUUGGA   UAGGUGUG  UGC    \
                  CGAG  GGAGA  CUUAGGAACUU   AUCCACAC  ACG    U
GAAGAUGUACGUCUGUUC    UC     AA^          ---        A-   UGAC 
       110       100        90        80           70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-362-P4_5p

mirBase accession

MIMAT0006288

Sequence

0- AAUCCUUGGAACCUAGGUGUGAGUGC -26

Get sequence

Proposed targets

TargetScanVert: mml-miR-362-5p

Star sequence

Mml-Mir-362-P4_3p*

mirBase accession

MIMAT0006289

Sequence

37- AACACACCUAUUCAAGGAUUCA -59

Get sequence

Proposed targets

TargetScanVert: mml-miR-362-3p