MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-188-P3

Family name MIR-188 (all species)
Seed ACCCAUU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-660
Paralogues Mml-Mir-188-P1  Mml-Mir-188-P2 
Orthologues Bta-Mir-188-P3  Cfa-Mir-188-P3  Cja-Mir-188-P3  Cpo-Mir-188-P3  Dno-Mir-188-P3  Eca-Mir-188-P3  Ete-Mir-188-P3  Hsa-Mir-188-P3  Laf-Mir-188-P3  Mmr-Mir-188-P3  Ocu-Mir-188-P3  Pab-Mir-188-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014356.1: 49803687-49803745 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-188-P3)		 Mir-188-P1 CM014356.1: 49792095-49792153 [+] UCSC Ensembl
Mir-188-P2 CM014356.1: 49792448-49792507 [+] UCSC Ensembl
Mir-362-P3a-v1 CM014356.1: 49797348-49797409 [+] UCSC Ensembl
Mir-362-P3a-v2 CM014356.1: 49797348-49797409 [+] UCSC Ensembl
Mir-362-P4 CM014356.1: 49797871-49797929 [+] UCSC Ensembl
Mir-362-P3b CM014356.1: 49801117-49801177 [+] UCSC Ensembl
Mir-188-P3 CM014356.1: 49803687-49803745 [+] UCSC Ensembl
Mir-362-P6 CM014356.1: 49805039-49805098 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCAGAAGAAUGAACUGCUCCUUCUCCCAUACCCAUUGCAUAUCGGAGUUGUAAAUUCUCAAAACACCUCCUGUGUGCAUGGAUUACAGGAGGGUGAGCCUUGUCAUCGUGAAUCUUC
Get precursor sequence
Structure
        10          20        30         40        50         
GUGCAGAAGAAUGAACU--    C      CAUAC-|   U      C    U   AAAUU 
                   GCUC UUCUCC      CCAU GCAUAU GGAG UGU     \
                   CGAG GGGAGG      GGUA CGUGUG CCUC ACA     C
CUUCUAAGUGCUACUGUUC    U      ACAUUA^   -      U    C   AAACU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-188-P3_5p
mirBase accessionMIMAT0006499
Sequence 
0- UACCCAUUGCAUAUCGGAGUUGU -23
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Proposed targets TargetScanVert: mml-miR-660-5p
Star sequence

Mml-Mir-188-P3_3p*
mirBase accessionMIMAT0026907
Sequence 
36- ACCUCCUGUGUGCAUGGAUUACA -59
Get sequence
Proposed targets TargetScanVert: mml-miR-660-3p