MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-188-P3

Family name MIR-188 (all species)
Seed ACCCAUU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-660
Paralogues Dno-Mir-188-P1  Dno-Mir-188-P2 
Orthologues Bta-Mir-188-P3  Cfa-Mir-188-P3  Cja-Mir-188-P3  Cpo-Mir-188-P3  Eca-Mir-188-P3  Ete-Mir-188-P3  Hsa-Mir-188-P3  Laf-Mir-188-P3  Mml-Mir-188-P3  Mmr-Mir-188-P3  Ocu-Mir-188-P3  Pab-Mir-188-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)		 JH569306: 1554037-1554096 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-188-P3)		 Mir-188-P1 JH569306: 1544821-1544879 [+] UCSC Ensembl
Mir-188-P2 JH569306: 1545145-1545204 [+] UCSC Ensembl
Mir-362-P3a-v1 JH569306: 1548488-1548549 [+] UCSC Ensembl
Mir-362-P3a-v2 JH569306: 1548489-1548548 [+] UCSC Ensembl
Mir-362-P4 JH569306: 1549504-1549562 [+] UCSC Ensembl
Mir-362-P3b JH569306: 1550649-1550711 [+] UCSC Ensembl
Mir-188-P3 JH569306: 1554037-1554096 [+] UCSC Ensembl
Mir-362-P6 JH569306: 1556109-1556168 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCAGAAGAAUGAACUGCUCCUCCUCCCAUACCCAUUGCAUAUCGGAGUUGUGAUUUCUCAAAAACACCUCCUGUGUGCAUGGAUUACAGGAGGGUGAGCCUUGCCUUCAUGAGCCUUC
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Structure
        10          20        30         40        50         
GUGCAGAAGAAUGAACU--    C      CAUAC-|   U      C    U   GAUUU 
                   GCUC UCCUCC      CCAU GCAUAU GGAG UGU     C
                   CGAG GGGAGG      GGUA CGUGUG CCUC ACA     U
CUUCCGAGUACUUCCGUUC    U      ACAUUA^   -      U    C   AAAAC 
.       110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Dno-Mir-188-P3_5p
mirBase accessionMIMAT0047994
Sequence 
0- UACCCAUUGCAUAUCGGAGUUGU -23
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Star sequence

Dno-Mir-188-P3_3p*
mirBase accessionMIMAT0047995
Sequence 
37- ACCUCCUGUGUGCAUGGAUUACA -60
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