MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-188-P3

Family name MIR-188 (all species)
Seed ACCCAUU
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-660
Paralogues Mmr-Mir-188-P1  Mmr-Mir-188-P2 
Orthologues Bta-Mir-188-P3  Cfa-Mir-188-P3  Cja-Mir-188-P3  Cpo-Mir-188-P3  Dno-Mir-188-P3  Eca-Mir-188-P3  Ete-Mir-188-P3  Hsa-Mir-188-P3  Laf-Mir-188-P3  Mml-Mir-188-P3  Ocu-Mir-188-P3  Pab-Mir-188-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007693.1: 138621731-138621789 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-188-P3)		 Mir-188-P1 CM007693.1: 138605615-138605673 [+] UCSC Ensembl
Mir-188-P2 CM007693.1: 138605984-138606043 [+] UCSC Ensembl
Mir-362-P3a-v1 CM007693.1: 138618071-138618132 [+] UCSC Ensembl
Mir-362-P3a-v2 CM007693.1: 138618071-138618132 [+] UCSC Ensembl
Mir-362-P3b-v1 CM007693.1: 138619927-138619987 [+] UCSC Ensembl
Mir-362-P3b-v2 CM007693.1: 138619927-138619987 [+] UCSC Ensembl
Mir-188-P3 CM007693.1: 138621731-138621789 [+] UCSC Ensembl
Mir-362-P6 CM007693.1: 138623099-138623157 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCAGAAGAACCAAUUGCUCCUUCUCCCAUACCCAUUGCAUAUCGGAGUUGUGAAUUCUCAAAACACCUCCUGUGUGCAUGGAUUACAGGAGGGUGAGCCUGGUCAUCGAGAAGCUUC
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Structure
        10          20        30         40        50         
GUGCAGAAGAACCAAUU--    C      CAUAC-|   U      C    U   GAAUU 
                   GCUC UUCUCC      CCAU GCAUAU GGAG UGU     \
                   CGAG GGGAGG      GGUA CGUGUG CCUC ACA     C
CUUCGAAGAGCUACUGGUC    U      ACAUUA^   -      U    C   AAACU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-188-P3_5p
mirBase accessionMIMAT0049181
Sequence 
0- UACCCAUUGCAUAUCGGAGUUGU -23
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Star sequence

Mmr-Mir-188-P3_3p*
mirBase accessionNone
Sequence 
36- ACCUCCUGUGUGCAUGGAUUACA -59
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