MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-188-P3

Family name MIR-188 (all species)
Seed ACCCAUU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-188-P3  Cfa-Mir-188-P3  Cja-Mir-188-P3  Cpo-Mir-188-P3  Dno-Mir-188-P3  Eca-Mir-188-P3  Hsa-Mir-188-P3  Laf-Mir-188-P3  Mml-Mir-188-P3  Mmr-Mir-188-P3  Ocu-Mir-188-P3  Pab-Mir-188-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980365: 3855815-3855873 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGUGUGCAGAAUGAAUUGCUCCUUCUCCCAUACCCAUUGCAUAUCGGAGUUGUGAUUUCUCAAAACACCUCCUAUGUGCAUGGAUUACAGGAGGGUGAGCCUUGUCUUCAUGAACCUUC
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Structure
        10          20        30         40        50         
GGUGUGCAGAAUGAAUU--    C      CAUAC-|   U      C    U   GAUUU 
                   GCUC UUCUCC      CCAU GCAUAU GGAG UGU     \
                   CGAG GGGAGG      GGUA CGUGUA CCUC ACA     C
CUUCCAAGUACUUCUGUUC    U      ACAUUA^   -      U    C   AAACU 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-188-P3_5p
mirBase accessionNone
Sequence 
0- UACCCAUUGCAUAUCGGAGUUGU -23
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Star sequence

Ete-Mir-188-P3_3p*
mirBase accessionNone
Sequence 
36- ACCUCCUAUGUGCAUGGAUUACA -59
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