MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-362-P3a-v2

Family name MIR-362 (all species)
Seed UGCACCU
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-502b
Paralogues Mmr-Mir-362-P3a-v1  Mmr-Mir-362-P3b-v1  Mmr-Mir-362-P3b-v2  Mmr-Mir-362-P4  Mmr-Mir-362-P5  Mmr-Mir-362-P6 
Orthologues Bta-Mir-362-P3a-v1  Bta-Mir-362-P3a-v2  Bta-Mir-362-P3a-v3  Cfa-Mir-362-P3a-v1  Cfa-Mir-362-P3a-v2  Cja-Mir-362-P3a-v1  Cja-Mir-362-P3a-v2  Dno-Mir-362-P3a-v1  Dno-Mir-362-P3a-v2  Eca-Mir-362-P3a-v1  Eca-Mir-362-P3a-v2  Hsa-Mir-362-P3a-v1  Hsa-Mir-362-P3a-v2  Mml-Mir-362-P3a-v1  Mml-Mir-362-P3a-v2  Ocu-Mir-362-P3a  Pab-Mir-362-P3a-v1  Pab-Mir-362-P3a-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007693.1: 138618071-138618132 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P3a-v2)
Mir-188-P1 CM007693.1: 138605615-138605673 [+] UCSC Ensembl
Mir-188-P2 CM007693.1: 138605984-138606043 [+] UCSC Ensembl
Mir-362-P3a-v1 CM007693.1: 138618071-138618132 [+] UCSC Ensembl
Mir-362-P3a-v2 CM007693.1: 138618071-138618132 [+] UCSC Ensembl
Mir-362-P3b-v1 CM007693.1: 138619927-138619987 [+] UCSC Ensembl
Mir-362-P3b-v2 CM007693.1: 138619927-138619987 [+] UCSC Ensembl
Mir-188-P3 CM007693.1: 138621731-138621789 [+] UCSC Ensembl
Mir-362-P6 CM007693.1: 138623099-138623157 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACAGGGCCUCCUGCUCUGCUCCCCCUCUCUAAUCCUUGCUACCUGGGUGAAAGUGCUGUCUGAAUGCAAUGCACCUGGGCAAGGAUUCUGAGAGUGUGAGCUUCAUCUUCAUGUAGGACAA
Get precursor sequence
Structure
        10          20        30         40        50         60 
CACAGGGCCUCCUGCUCU--    CCC     U-|        UAC UG    AAA-  GCUGU 
                    GCUC   CUCUC  AAUCCUUGC   C  GGUG    GU     \
                    CGAG   GAGAG  UUAGGAACG   G  CCAC    CG     C
AACAGGAUGUACUUCUACUU    UGU     UC^        --- GU    GUAA  UAAGU 
120       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-362-P3a-v2_5p*

mirBase accessionNone
Sequence
0- UAAUCCUUGCUACCUGGGUGAAAGU -25
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Mature sequence

Mmr-Mir-362-P3a-v2_3p

mirBase accessionMIMAT0049183
Sequence
39- AUGCACCUGGGCAAGGAUUCUGA -62
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