| MirGeneDB ID | Cja-Mir-362-P3a-v2 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | UGCACCU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-362-P3a-v1 Cja-Mir-362-P4 Cja-Mir-362-P5 |
| Orthologues | Bta-Mir-362-P3a-v1 Bta-Mir-362-P3a-v2 Bta-Mir-362-P3a-v3 Cfa-Mir-362-P3a-v1 Cfa-Mir-362-P3a-v2 Dno-Mir-362-P3a-v1 Dno-Mir-362-P3a-v2 Eca-Mir-362-P3a-v1 Eca-Mir-362-P3a-v2 Hsa-Mir-362-P3a-v1 Hsa-Mir-362-P3a-v2 Mml-Mir-362-P3a-v1 Mml-Mir-362-P3a-v2 Mmr-Mir-362-P3a-v1 Mmr-Mir-362-P3a-v2 Ocu-Mir-362-P3a Pab-Mir-362-P3a-v1 Pab-Mir-362-P3a-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 48749996-48750057 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GGCAGGGCUUUGUGCUCUGCUCCCCCUCUCUAAUCCUUGCUACCUGGGUGAGAGUGCUGUCUGAAUGCAAUGCACCUGGGCAAGGAUUCUGAGAGCGAGAGCUUCAUCUUCGUGUAGGAUGGGet precursor sequence |
| Structure | 10 20 30 40 50 60 GGCAGGGCUUUGUGCUCU-- CCC U-| UAC UG AGA- GCUGU GCUC CUCUC AAUCCUUGC C GGUG GU \ CGAG GAGAG UUAGGAACG G CCAC CG C GGUAGGAUGUGCUUCUACUU AGC UC^ --- GU GUAA UAAGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-362-P3a-v2_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- UAAUCCUUGCUACCUGGGUGAGAGU -25
Get sequence
|
| Mature sequence | Cja-Mir-362-P3a-v2_3p |
| mirBase accession | None |
| Sequence |
39- AUGCACCUGGGCAAGGAUUCUGA -62
Get sequence
|
