| MirGeneDB ID | Mml-Mir-362-P3a-v1 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AUGCACC |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-500a |
| Paralogues | Mml-Mir-362-P3a-v2 Mml-Mir-362-P3b Mml-Mir-362-P4 Mml-Mir-362-P5 Mml-Mir-362-P6 |
| Orthologues | Bta-Mir-362-P3a-v1 Bta-Mir-362-P3a-v2 Bta-Mir-362-P3a-v3 Cfa-Mir-362-P3a-v1 Cfa-Mir-362-P3a-v2 Cja-Mir-362-P3a-v1 Cja-Mir-362-P3a-v2 Dno-Mir-362-P3a-v1 Dno-Mir-362-P3a-v2 Eca-Mir-362-P3a-v1 Eca-Mir-362-P3a-v2 Hsa-Mir-362-P3a-v1 Hsa-Mir-362-P3a-v2 Mmr-Mir-362-P3a-v1 Mmr-Mir-362-P3a-v2 Ocu-Mir-362-P3a Pab-Mir-362-P3a-v1 Pab-Mir-362-P3a-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014356.1: 49797348-49797409 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-362-P3a-v1) |
Mir-188-P1
CM014356.1: 49792095-49792153 [+]
UCSC
Ensembl
Mir-188-P2 CM014356.1: 49792448-49792507 [+] UCSC Ensembl Mir-362-P3a-v1 CM014356.1: 49797348-49797409 [+] UCSC Ensembl Mir-362-P3a-v2 CM014356.1: 49797348-49797409 [+] UCSC Ensembl Mir-362-P4 CM014356.1: 49797871-49797929 [+] UCSC Ensembl Mir-362-P3b CM014356.1: 49801117-49801177 [+] UCSC Ensembl Mir-188-P3 CM014356.1: 49803687-49803745 [+] UCSC Ensembl Mir-362-P6 CM014356.1: 49805039-49805098 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGCAGGGCUUUGUGCUCUGCUCCCCCUCUCUAAUCCUUGCUACCUGGGUGAGAGUGCUAUCUGAAUGCAAUGCACCUGGGCAAGGAUUCUGAGAGCGAGAGCUUCAUCUUCAUGUAGGACAGGet precursor sequence |
| Structure | 10 20 30 40 50 60 CGCAGGGCUUUGUGCUCU-- CCC U-| UAC UG AGA- GCUAU GCUC CUCUC AAUCCUUGC C GGUG GU \ CGAG GAGAG UUAGGAACG G CCAC CG C GACAGGAUGUACUUCUACUU AGC UC^ --- GU GUAA UAAGU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Mml-Mir-362-P3a-v1_5p* |
| mirBase accession | MIMAT0006363 |
| Sequence |
0- UAAUCCUUGCUACCUGGGUGAGAGU -25
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-500a-5p |
| Mature sequence | Mml-Mir-362-P3a-v1_3p |
| mirBase accession | MIMAT0026888 |
| Sequence |
38- AAUGCACCUGGGCAAGGAUUCUGA -62
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-500a-3p |
