| MirGeneDB ID | Mml-Mir-362-P3b |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AAUCCUU |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-500b |
| Paralogues | Mml-Mir-362-P3a-v1 Mml-Mir-362-P3a-v2 Mml-Mir-362-P4 Mml-Mir-362-P5 Mml-Mir-362-P6 |
| Orthologues | Bta-Mir-362-P3b-v1 Bta-Mir-362-P3b-v2 Cfa-Mir-362-P3b Cpo-Mir-362-P3b Dno-Mir-362-P3b Eca-Mir-362-P3b-v1 Eca-Mir-362-P3b-v2 Hsa-Mir-362-P3b Mmr-Mir-362-P3b-v1 Mmr-Mir-362-P3b-v2 Pab-Mir-362-P3b |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014356.1: 49801117-49801177 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-362-P3b) |
Mir-188-P1
CM014356.1: 49792095-49792153 [+]
UCSC
Ensembl
Mir-188-P2 CM014356.1: 49792448-49792507 [+] UCSC Ensembl Mir-362-P3a-v1 CM014356.1: 49797348-49797409 [+] UCSC Ensembl Mir-362-P3a-v2 CM014356.1: 49797348-49797409 [+] UCSC Ensembl Mir-362-P4 CM014356.1: 49797871-49797929 [+] UCSC Ensembl Mir-362-P3b CM014356.1: 49801117-49801177 [+] UCSC Ensembl Mir-188-P3 CM014356.1: 49803687-49803745 [+] UCSC Ensembl Mir-362-P6 CM014356.1: 49805039-49805098 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUGGAAUCUUCUGUCCUGGCUCCCCCUGUCUAAUCCUUGCUACCUGGGUGAGAGUGCUUUCUGAAUGCAGUGCACCCAGGCAAGGAUUCUGCAAGGGGGAGUGACAUCUUCGCAUAGGACAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CUGGAAUCUUCUGUCCUG- -| CU UAC AGA- GCUUU GCUCCCCC UGU AAUCCUUGC CUGGGUG GU \ UGAGGGGG ACG UUAGGAACG GACCCAC CG C ACAGGAUACGCUUCUACAG A^ UC --- GUGA UAAGU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Mml-Mir-362-P3b_5p |
| mirBase accession | MIMAT0028236 |
| Sequence |
0- UAAUCCUUGCUACCUGGGUGAGAGU -25
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-500b-5p |
| Star sequence | Mml-Mir-362-P3b_3p* |
| mirBase accession | MIMAT0028237 |
| Sequence |
38- AGUGCACCCAGGCAAGGAUUCUG -61
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-500b-3p |
