Mir-362-P3b

MirGeneDB ID

Mml-Mir-362-P3b

Family name

MIR-362 (all species)

Seed

AAUCCUU

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-500b

Paralogues

Mml-Mir-362-P3a-v1 Mml-Mir-362-P3a-v2 Mml-Mir-362-P4 Mml-Mir-362-P5 Mml-Mir-362-P6

Orthologues

Bta-Mir-362-P3b-v1 Bta-Mir-362-P3b-v2 Cfa-Mir-362-P3b Cpo-Mir-362-P3b Dno-Mir-362-P3b Eca-Mir-362-P3b-v1 Eca-Mir-362-P3b-v2 Hsa-Mir-362-P3b Mmr-Mir-362-P3b-v1 Mmr-Mir-362-P3b-v2 Pab-Mir-362-P3b

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014356.1: 49801117-49801177 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P3b)

Mir-188-P1 CM014356.1: 49792095-49792153 [+] UCSC Ensembl
Mir-188-P2 CM014356.1: 49792448-49792507 [+] UCSC Ensembl
Mir-362-P3a-v1 CM014356.1: 49797348-49797409 [+] UCSC Ensembl
Mir-362-P3a-v2 CM014356.1: 49797348-49797409 [+] UCSC Ensembl
Mir-362-P4 CM014356.1: 49797871-49797929 [+] UCSC Ensembl
Mir-362-P3b CM014356.1: 49801117-49801177 [+] UCSC Ensembl
Mir-188-P3 CM014356.1: 49803687-49803745 [+] UCSC Ensembl
Mir-362-P6 CM014356.1: 49805039-49805098 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUGGAAUCUUCUGUCCUGGCUCCCCCUGUCUAAUCCUUGCUACCUGGGUGAGAGUGCUUUCUGAAUGCAGUGCACCCAGGCAAGGAUUCUGCAAGGGGGAGUGACAUCUUCGCAUAGGACA

Get precursor sequence

Structure

        10         20         30        40        50         60 
CUGGAAUCUUCUGUCCUG-        -|  CU         UAC       AGA-  GCUUU 
                   GCUCCCCC UGU  AAUCCUUGC   CUGGGUG    GU     \
                   UGAGGGGG ACG  UUAGGAACG   GACCCAC    CG     C
ACAGGAUACGCUUCUACAG        A^  UC         ---       GUGA  UAAGU 
 .       110       100        90        80           70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Mature sequence

Mml-Mir-362-P3b_5p

mirBase accession

MIMAT0028236

Sequence

0- UAAUCCUUGCUACCUGGGUGAGAGU -25

Get sequence

Proposed targets

TargetScanVert: mml-miR-500b-5p

Star sequence

Mml-Mir-362-P3b_3p*

mirBase accession

MIMAT0028237

Sequence

38- AGUGCACCCAGGCAAGGAUUCUG -61

Get sequence

Proposed targets

TargetScanVert: mml-miR-500b-3p