| MirGeneDB ID | Mml-Mir-362-P6 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AUGCACC |
| Species | Rhesus monkey (Macaca mulatta) |
| MiRBase ID | mml-mir-502 |
| Paralogues | Mml-Mir-362-P3a-v1 Mml-Mir-362-P3a-v2 Mml-Mir-362-P3b Mml-Mir-362-P4 Mml-Mir-362-P5 |
| Orthologues | Bta-Mir-362-P6 Cfa-Mir-362-P6 Cpo-Mir-362-P6 Dno-Mir-362-P6 Eca-Mir-362-P6 Ete-Mir-362-P6 Hsa-Mir-362-P6 Laf-Mir-362-P6 Mmr-Mir-362-P6 Mmu-Mir-362-P6 Ocu-Mir-362-P6 Pab-Mir-362-P6 Rno-Mir-362-P6 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014356.1: 49805039-49805098 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-362-P6) |
Mir-188-P1
CM014356.1: 49792095-49792153 [+]
UCSC
Ensembl
Mir-188-P2 CM014356.1: 49792448-49792507 [+] UCSC Ensembl Mir-362-P3a-v1 CM014356.1: 49797348-49797409 [+] UCSC Ensembl Mir-362-P3a-v2 CM014356.1: 49797348-49797409 [+] UCSC Ensembl Mir-362-P4 CM014356.1: 49797871-49797929 [+] UCSC Ensembl Mir-362-P3b CM014356.1: 49801117-49801177 [+] UCSC Ensembl Mir-188-P3 CM014356.1: 49803687-49803745 [+] UCSC Ensembl Mir-362-P6 CM014356.1: 49805039-49805098 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCCAAGCCUUCUGCCCUGUUCUCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGUCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGGGAGCUCAACUGUACCAAGAAGGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCCAAGCCUUCUGCCCU-- -| UAU UG UAG UGUC GUUCUCCCUCUCU AAUCCUUGC C GGUGC UGC \ CGAGGGGGAGAGA UUAGGAACG G CCACG ACG U AGGAAGAACCAUGUCAACU C^ --- GU UA- UAAC . 110 100 90 80 70 |
| Deep sequencing | |
| Comment | There is a second Drosha cut -1 on the 5p arm. |
| 3' NTU | No |
| Motifs | UG at 5p(-14), UGUG in loop |
| Star sequence | Mml-Mir-362-P6_5p* |
| mirBase accession | MIMAT0006365 |
| Sequence |
0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-502-5p |
| Mature sequence | Mml-Mir-362-P6_3p |
| mirBase accession | MIMAT0006366 |
| Sequence |
37- AAUGCACCUGGGCAAGGAUUCAG -60
Get sequence
|
| Proposed targets |
TargetScanVert: mml-miR-502-3p |
