Mir-362-P6

MirGeneDB ID

Mml-Mir-362-P6

Family name

MIR-362 (all species)

Seed

AUGCACC

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-502

Paralogues

Mml-Mir-362-P3a-v1 Mml-Mir-362-P3a-v2 Mml-Mir-362-P3b Mml-Mir-362-P4 Mml-Mir-362-P5

Orthologues

Bta-Mir-362-P6 Cfa-Mir-362-P6 Cpo-Mir-362-P6 Dno-Mir-362-P6 Eca-Mir-362-P6 Ete-Mir-362-P6 Hsa-Mir-362-P6 Laf-Mir-362-P6 Mmr-Mir-362-P6 Mmu-Mir-362-P6 Ocu-Mir-362-P6 Pab-Mir-362-P6 Rno-Mir-362-P6

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014356.1: 49805039-49805098 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P6)

Mir-188-P1 CM014356.1: 49792095-49792153 [+] UCSC Ensembl
Mir-188-P2 CM014356.1: 49792448-49792507 [+] UCSC Ensembl
Mir-362-P3a-v1 CM014356.1: 49797348-49797409 [+] UCSC Ensembl
Mir-362-P3a-v2 CM014356.1: 49797348-49797409 [+] UCSC Ensembl
Mir-362-P4 CM014356.1: 49797871-49797929 [+] UCSC Ensembl
Mir-362-P3b CM014356.1: 49801117-49801177 [+] UCSC Ensembl
Mir-188-P3 CM014356.1: 49803687-49803745 [+] UCSC Ensembl
Mir-362-P6 CM014356.1: 49805039-49805098 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCCAAGCCUUCUGCCCUGUUCUCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGUCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGGGAGCUCAACUGUACCAAGAAGGA

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Structure

        10          20        30         40        50        60 
CCCAAGCCUUCUGCCCU--             -|        UAU UG     UAG   UGUC 
                   GUUCUCCCUCUCU AAUCCUUGC   C  GGUGC   UGC    \
                   CGAGGGGGAGAGA UUAGGAACG   G  CCACG   ACG    U
AGGAAGAACCAUGUCAACU             C^        --- GU     UA-   UAAC 
.       110       100        90        80           70

Deep sequencing

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Comment

There is a second Drosha cut -1 on the 5p arm.

3' NTU

Motifs

UG at 5p(-14), UGUG in loop

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-362-P6_5p*

mirBase accession

MIMAT0006365

Sequence

0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26

Get sequence

Proposed targets

TargetScanVert: mml-miR-502-5p

Mature sequence

Mml-Mir-362-P6_3p

mirBase accession

MIMAT0006366

Sequence

37- AAUGCACCUGGGCAAGGAUUCAG -60

Get sequence

Proposed targets

TargetScanVert: mml-miR-502-3p