MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-362-P6

Family name MIR-362 (all species)
Seed AUGCACC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-502a
Paralogues Ocu-Mir-362-P2  Ocu-Mir-362-P3a  Ocu-Mir-362-P4  Ocu-Mir-362-P5 
Orthologues Bta-Mir-362-P6  Cfa-Mir-362-P6  Cpo-Mir-362-P6  Dno-Mir-362-P6  Eca-Mir-362-P6  Ete-Mir-362-P6  Hsa-Mir-362-P6  Laf-Mir-362-P6  Mml-Mir-362-P6  Mmr-Mir-362-P6  Mmu-Mir-362-P6  Pab-Mir-362-P6  Rno-Mir-362-P6 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrX: 34243943-34244002 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P6)		 Mir-188-P1 chrX: 34232287-34232345 [+] UCSC Ensembl
Mir-188-P2 chrX: 34232654-34232713 [+] UCSC Ensembl
Mir-362-P2 chrX: 34235397-34235456 [+] UCSC Ensembl
Mir-362-P3a chrX: 34237519-34237579 [+] UCSC Ensembl
Mir-362-P4 chrX: 34238027-34238085 [+] UCSC Ensembl
Mir-362-P5 chrX: 34238810-34238869 [+] UCSC Ensembl
Mir-188-P3 chrX: 34242048-34242106 [+] UCSC Ensembl
Mir-362-P6 chrX: 34243943-34244002 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGAGCCUUCUGCUCUGCUCCCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUAUCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGUGAGCUUGACUGCAUCAAGAAGGA
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Structure
        10          20        30         40        50        60 
CCUGAGCCUUCUGCUCU--    C        -|        UAU UG     UAG   UAUC 
                   GCUC CCCUCUCU AAUCCUUGC   C  GGUGC   UGC    \
                   CGAG GGGAGAGA UUAGGAACG   G  CCACG   ACG    U
AGGAAGAACUACGUCAGUU    U        C^        --- GU     UA-   UAAC 
.       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-362-P6_5p*
mirBase accessionMIMAT0048495
Sequence 
0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26
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Mature sequence

Ocu-Mir-362-P6_3p
mirBase accessionMIMAT0048496
Sequence 
37- AAUGCACCUGGGCAAGGAUUCAG -60
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