MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-362-P6

Family name MIR-362 (all species)
Seed AUGCACC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-502
Paralogues Cfa-Mir-362-P3a-v1  Cfa-Mir-362-P3a-v2  Cfa-Mir-362-P3b  Cfa-Mir-362-P4 
Orthologues Bta-Mir-362-P6  Cpo-Mir-362-P6  Dno-Mir-362-P6  Eca-Mir-362-P6  Ete-Mir-362-P6  Hsa-Mir-362-P6  Laf-Mir-362-P6  Mml-Mir-362-P6  Mmr-Mir-362-P6  Mmu-Mir-362-P6  Ocu-Mir-362-P6  Pab-Mir-362-P6  Rno-Mir-362-P6 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 42785601-42785660 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P6)		 Mir-188-P1 chrX: 42774680-42774738 [+] UCSC Ensembl
Mir-188-P2 chrX: 42775072-42775131 [+] UCSC Ensembl
Mir-362-P3a-v1 chrX: 42779871-42779932 [+] UCSC Ensembl
Mir-362-P3a-v2 chrX: 42779872-42779931 [+] UCSC Ensembl
Mir-362-P4 chrX: 42780369-42780427 [+] UCSC Ensembl
Mir-188-P3 chrX: 42783965-42784023 [+] UCSC Ensembl
Mir-362-P6 chrX: 42785601-42785660 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCAGCUUUCCGCGCUGCUCCCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGUCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGUGGGCUCAACUGCAUCAAGAAGAA
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Structure
        10          20        30         40        50        60 
CUUCAGCUUUCCGCGCU--    C        -|        UAU UG     UAG   UGUC 
                   GCUC CCCUCUCU AAUCCUUGC   C  GGUGC   UGC    \
                   CGGG GGGAGAGA UUAGGAACG   G  CCACG   ACG    U
AAGAAGAACUACGUCAACU    U        C^        --- GU     UA-   UAAC 
.       110       100        90        80           70
Deep sequencing
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CommentThere is a second Drosha cut -1 on the 5p arm.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-362-P6_5p*
mirBase accessionNone
Sequence 
0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26
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Mature sequence

Cfa-Mir-362-P6_3p
mirBase accessionMIMAT0006761
Sequence 
37- AAUGCACCUGGGCAAGGAUUCAG -60
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Proposed targets TargetScanVert: cfa-miR-502
miRDB: MIMAT0006761