MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-362-P6

Family name MIR-362 (all species)
Seed AUGCACC
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-362-P3a-v1  Pab-Mir-362-P3a-v2  Pab-Mir-362-P3b  Pab-Mir-362-P4  Pab-Mir-362-P5 
Orthologues Bta-Mir-362-P6  Cfa-Mir-362-P6  Cpo-Mir-362-P6  Dno-Mir-362-P6  Eca-Mir-362-P6  Ete-Mir-362-P6  Hsa-Mir-362-P6  Laf-Mir-362-P6  Mml-Mir-362-P6  Mmr-Mir-362-P6  Mmu-Mir-362-P6  Ocu-Mir-362-P6  Rno-Mir-362-P6 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054702.2: 50290996-50291055 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAAGCCUUCUGCCCUGCUCCCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGUCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGGGAGCUCAACUGUACCAACAAGGA
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Structure
        10          20        30         40        50        60 
CCCAAGCCUUCUGCCCU--             -|        UAU UG     UAG   UGUC 
                   GCUCCCCCUCUCU AAUCCUUGC   C  GGUGC   UGC    \
                   CGAGGGGGAGAGA UUAGGAACG   G  CCACG   ACG    U
AGGAACAACCAUGUCAACU             C^        --- GU     UA-   UAAC 
.       110       100        90        80           70
Deep sequencing
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CommentThere is a second Drosha cut -1 on the 5p arm.
3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-362-P6_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26
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Mature sequence

Pab-Mir-362-P6_3p
mirBase accessionNone
Sequence 
37- AAUGCACCUGGGCAAGGAUUCAG -60
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