| MirGeneDB ID | Dno-Mir-362-P6 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AUGCACC |
| Species | Nine-banded armadillo (Dasypus novemcinctus) |
| MiRBase ID | dno-mir-502 |
| Paralogues | Dno-Mir-362-P3a-v1 Dno-Mir-362-P3a-v2 Dno-Mir-362-P3b Dno-Mir-362-P4 |
| Orthologues | Bta-Mir-362-P6 Cfa-Mir-362-P6 Cpo-Mir-362-P6 Eca-Mir-362-P6 Ete-Mir-362-P6 Hsa-Mir-362-P6 Laf-Mir-362-P6 Mml-Mir-362-P6 Mmr-Mir-362-P6 Mmu-Mir-362-P6 Ocu-Mir-362-P6 Pab-Mir-362-P6 Rno-Mir-362-P6 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (dasNov3) |
JH569306: 1556109-1556168 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-362-P6) |
Mir-188-P1
JH569306: 1544821-1544879 [+]
UCSC
Ensembl
Mir-188-P2 JH569306: 1545145-1545204 [+] UCSC Ensembl Mir-362-P3a-v1 JH569306: 1548488-1548549 [+] UCSC Ensembl Mir-362-P3a-v2 JH569306: 1548489-1548548 [+] UCSC Ensembl Mir-362-P4 JH569306: 1549504-1549562 [+] UCSC Ensembl Mir-362-P3b JH569306: 1550649-1550711 [+] UCSC Ensembl Mir-188-P3 JH569306: 1554037-1554096 [+] UCSC Ensembl Mir-362-P6 JH569306: 1556109-1556168 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCUGAGCCUUCUUCCCUGUUCCCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUAUCUCAAUGCAAUGCACCUAGGCAAGGAUUCAGAGAGGGUGAGCUCGANNNNNNNNNNNNNNNGet precursor sequence |
| Structure | 10 20 30 40 50 60 UCUGAGCCUUCUUCCCU-- C -| UAU UAG UAUC GUUC CCCUCUCU AAUCCUUGC CUGGGUGC UGC \ CGAG GGGAGAGA UUAGGAACG GAUCCACG ACG U NNNNNNNNNNNNNNNAGCU U C^ --- UA- UAAC . 110 100 90 80 70 |
| Deep sequencing | |
| Comment | There is a second Drosha cut -1 on the 5p arm. |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Star sequence | Dno-Mir-362-P6_5p* |
| mirBase accession | MIMAT0047942 |
| Sequence |
0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26
Get sequence
|
| Mature sequence | Dno-Mir-362-P6_3p |
| mirBase accession | MIMAT0047943 |
| Sequence |
37- AAUGCACCUAGGCAAGGAUUCAG -60
Get sequence
|
