MirGeneDB 3.0
MirGeneDB ID

Rno-Mir-362-P6

Family name MIR-362 (all species)
Seed AUGCACC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-500
Paralogues Rno-Mir-362-P4  Rno-Mir-362-P5 
Orthologues Bta-Mir-362-P6  Cfa-Mir-362-P6  Cpo-Mir-362-P6  Dno-Mir-362-P6  Eca-Mir-362-P6  Ete-Mir-362-P6  Hsa-Mir-362-P6  Laf-Mir-362-P6  Mml-Mir-362-P6  Mmr-Mir-362-P6  Mmu-Mir-362-P6  Ocu-Mir-362-P6  Pab-Mir-362-P6 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 16121342-16121402 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P6)		 Mir-188-P1 chrX: 16109880-16109938 [+] UCSC Ensembl
Mir-188-P2 chrX: 16110280-16110339 [+] UCSC Ensembl
Mir-362-P4 chrX: 16117174-16117232 [+] UCSC Ensembl
Mir-362-P5 chrX: 16117887-16117946 [+] UCSC Ensembl
Mir-362-P6 chrX: 16121342-16121402 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGAUCCUUCUCCUCUGCUCCCCCUCUCUAAUCCUUGCUAUCUGGGUGCUUAGUGCUAUCUCAAUGCAAUGCACCUGGGCAAGGGUUCAGAGAAGGUGAGCUCAUCUGCAGCAAGAAGGA
Get precursor sequence
Structure
        10          20        30         40        50        60 
CCUGAUCCUUCUCCUCU--    C  C     -|        UAU UG     UUA  GCUAU 
                   GCUC CC UCUCU AAUCCUUGC   C  GGUGC   GU     \
                   CGAG GG AGAGA UUGGGAACG   G  CCACG   CG     C
AGGAAGAACGACGUCUACU    U  A     C^        --- GU     UAA  UAACU 
 .       110       100        90        80           70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Star sequence

Rno-Mir-362-P6_5p*
mirBase accessionMIMAT0017311
Sequence 
0- AAUCCUUGCUAUCUGGGUGCUUAGU -25
Get sequence
Proposed targets TargetScanVert: rno-miR-500-5p
miRDB: MIMAT0017311
Mature sequence

Rno-Mir-362-P6_3p
mirBase accessionMIMAT0005321
Sequence 
38- AAUGCACCUGGGCAAGGGUUCAG -61
Get sequence
Proposed targets microrna.org: MIMAT0005321
TargetScanVert: rno-miR-500-3p
miRDB: MIMAT0005321