| MirGeneDB ID | Laf-Mir-362-P6 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AUGCACC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-362-P1 Laf-Mir-362-P2 Laf-Mir-362-P4 |
| Orthologues | Bta-Mir-362-P6 Cfa-Mir-362-P6 Cpo-Mir-362-P6 Dno-Mir-362-P6 Eca-Mir-362-P6 Ete-Mir-362-P6 Hsa-Mir-362-P6 Mml-Mir-362-P6 Mmr-Mir-362-P6 Mmu-Mir-362-P6 Ocu-Mir-362-P6 Pab-Mir-362-P6 Rno-Mir-362-P6 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010083.1: 316274-316333 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUUGAGUCUUCUACCCUGCUCCCUCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGUCUCAAUGCAAUGCACCUAGGCAAGGAUUCAGAGAGGGUGAGCUCAGCUGCAUCAAGAAGGAGet precursor sequence |
| Structure | 10 20 30 40 50 60 CUUGAGUCUUCUACCCU-- C -| UAU UAG UGUC GCUC CUCUCUCU AAUCCUUGC CUGGGUGC UGC \ CGAG GGGAGAGA UUAGGAACG GAUCCACG ACG U AGGAAGAACUACGUCGACU U C^ --- UA- UAAC . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
| Star sequence | Laf-Mir-362-P6_5p* |
| mirBase accession | None |
| Sequence |
0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26
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|
| Mature sequence | Laf-Mir-362-P6_3p |
| mirBase accession | None |
| Sequence |
37- AAUGCACCUAGGCAAGGAUUCAG -60
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|
