Mir-362-P6

MirGeneDB ID

Hsa-Mir-362-P6

Family name

MIR-362 (all species)

Seed

AUGCACC

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-502

Paralogues

Hsa-Mir-362-P3a-v1 Hsa-Mir-362-P3a-v2 Hsa-Mir-362-P3b Hsa-Mir-362-P4 Hsa-Mir-362-P5

Orthologues

Bta-Mir-362-P6 Cfa-Mir-362-P6 Cpo-Mir-362-P6 Dno-Mir-362-P6 Eca-Mir-362-P6 Ete-Mir-362-P6 Laf-Mir-362-P6 Mml-Mir-362-P6 Mmr-Mir-362-P6 Mmu-Mir-362-P6 Ocu-Mir-362-P6 Pab-Mir-362-P6 Rno-Mir-362-P6

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 50014612-50014671 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P6)

Mir-188-P1 chrX: 50003167-50003225 [+] UCSC Ensembl
Mir-188-P2 chrX: 50003517-50003576 [+] UCSC Ensembl
Mir-362-P3a-v1 chrX: 50008443-50008504 [+] UCSC Ensembl
Mir-362-P3a-v2 chrX: 50008443-50008504 [+] UCSC Ensembl
Mir-362-P4 chrX: 50008968-50009026 [+] UCSC Ensembl
Mir-362-P5 chrX: 50009735-50009794 [+] UCSC Ensembl
Mir-362-P3b chrX: 50010681-50010742 [+] UCSC Ensembl
Mir-188-P3 chrX: 50013256-50013314 [+] UCSC Ensembl
Mir-362-P6 chrX: 50014612-50014671 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCCAAGCCUUCUGCCCUGCUCCCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGGCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGGGAGCUCAACUGUACCAAGAAGGA

Get precursor sequence

Structure

        10          20        30         40        50        60 
CCCAAGCCUUCUGCCCU--             -|        UAU UG     UAG   UGGC 
                   GCUCCCCCUCUCU AAUCCUUGC   C  GGUGC   UGC    \
                   CGAGGGGGAGAGA UUAGGAACG   G  CCACG   ACG    U
AGGAAGAACCAUGUCAACU             C^        --- GU     UA-   UAAC 
.       110       100        90        80           70

Deep sequencing

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Comment

There is a second Drosha cut -1 on the 5p arm.

3' NTU

Motifs

UG at 5p(-14)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-362-P6_5p*

mirBase accession

MIMAT0002873

Sequence

0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26

Get sequence

Proposed targets

microrna.org: MIMAT0002873
TargetScanVert: hsa-miR-502-5p
TargetMiner: hsa-miR-502-5p
miRDB: MIMAT0002873

Mature sequence

Hsa-Mir-362-P6_3p

mirBase accession

MIMAT0004775

Sequence

37- AAUGCACCUGGGCAAGGAUUCAG -60

Get sequence

Proposed targets

microrna.org: MIMAT0004775
TargetScanVert: hsa-miR-502-3p
TargetMiner: hsa-miR-502-3p
miRDB: MIMAT0004775