Mir-362-P5

MirGeneDB ID

Hsa-Mir-362-P5

Family name

MIR-362 (all species)

Seed

AAUCCUU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-500b

Paralogues

Hsa-Mir-362-P1 Hsa-Mir-362-P2-v1 Hsa-Mir-362-P2-v2 Hsa-Mir-362-P3 Hsa-Mir-362-P4

Orthologues

Bta-Mir-362-P5 Cfa-Mir-362-P5 Cpo-Mir-362-P5 Dno-Mir-362-P5 Mml-Mir-362-P5

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 50010681-50010742 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P5)

Mir-188-P2 chrX: 50003167-50003225 [+] UCSC Ensembl
Mir-188-P1 chrX: 50003517-50003576 [+] UCSC Ensembl
Mir-362-P2-v1 chrX: 50008443-50008504 [+] UCSC Ensembl
Mir-362-P2-v2 chrX: 50008443-50008504 [+] UCSC Ensembl
Mir-362-P1 chrX: 50008968-50009026 [+] UCSC Ensembl
Mir-362-P3 chrX: 50009735-50009794 [+] UCSC Ensembl
Mir-362-P5 chrX: 50010681-50010742 [+] UCSC Ensembl
Mir-188-P3 chrX: 50013256-50013314 [+] UCSC Ensembl
Mir-362-P4 chrX: 50014612-50014671 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUGGAAUCUCCUGUCCUGGUUCCCCCUCUCUAAUCCUUGCUACCUGGGUGAGAGUGCUUUCUGAAUGCAGUGCACCCAGGCAAGGAUUCUGCAAGGGGGAGUGACAUCUUCGCAUAGGACAG

Get precursor sequence

Structure

        10          20        30         40        50         60 
CUGGAAUCUCCUGUCCUGG--        CUCU-|        UAC       AGA-  GCUUU 
                     UUCCCCCU     AAUCCUUGC   CUGGGUG    GU     \
                     GAGGGGGA     UUAGGAACG   GACCCAC    CG     C
GACAGGAUACGCUUCUACAGU        ACGUC^        ---       GUGA  UAAGU 
120       110       100        90        80           70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

1-	1-	1-	1-	1-	1-	1-	1-	1-	1-	1-	1-	1-	2-	2-	2-	2-	2-	2-	2-	2-	2-	2-	2-	3-	3-	3-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	4-	5-	5-	5-	5-	5-	5-	5-	6-	6-	6-	6-	6-

Mature sequence

Hsa-Mir-362-P5_5p

mirBase accession

MIMAT0016925

Sequence

0- UAAUCCUUGCUACCUGGGUGAGAGU -25

Get sequence

Proposed targets

microrna.org: MIMAT0016925
TargetScanVert: hsa-miR-500b-5p
miRDB: MIMAT0016925

Star sequence

Hsa-Mir-362-P5_3p*

mirBase accession

MIMAT0027032

Sequence

38- AGUGCACCCAGGCAAGGAUUCUGC -62

Get sequence

Proposed targets

TargetScanVert: hsa-miR-500b-3p
miRDB: MIMAT0027032