Mir-362-P5

MirGeneDB ID

Hsa-Mir-362-P5

Family name

MIR-362 (all species)

Seed

AUGCACC

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-501

Paralogues

Hsa-Mir-362-P3a-v1 Hsa-Mir-362-P3a-v2 Hsa-Mir-362-P3b Hsa-Mir-362-P4 Hsa-Mir-362-P6

Orthologues

Cja-Mir-362-P5 Cpo-Mir-362-P5 Eca-Mir-362-P5 Mml-Mir-362-P5 Mmr-Mir-362-P5 Mmu-Mir-362-P5 Ocu-Mir-362-P5 Pab-Mir-362-P5 Rno-Mir-362-P5

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(hg38)

chrX: 50009735-50009794 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P5)

Mir-188-P1 chrX: 50003167-50003225 [+] UCSC Ensembl
Mir-188-P2 chrX: 50003517-50003576 [+] UCSC Ensembl
Mir-362-P3a-v1 chrX: 50008443-50008504 [+] UCSC Ensembl
Mir-362-P3a-v2 chrX: 50008443-50008504 [+] UCSC Ensembl
Mir-362-P4 chrX: 50008968-50009026 [+] UCSC Ensembl
Mir-362-P5 chrX: 50009735-50009794 [+] UCSC Ensembl
Mir-362-P3b chrX: 50010681-50010742 [+] UCSC Ensembl
Mir-188-P3 chrX: 50013256-50013314 [+] UCSC Ensembl
Mir-362-P6 chrX: 50014612-50014671 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCUGAGUCUUCUGCUCUGCUCUUCCUCUCUAAUCCUUUGUCCCUGGGUGAGAGUGCUUUCUGAAUGCAAUGCACCCGGGCAAGGAUUCUGAGAGGGUGAGCCCCCUCUGCGUGGAGAACA

Get precursor sequence

Structure

        10          20        30         40        50           
CCUGAGUCUUCUGCUCU--    U       U-|      U U   U     AGA-  GCUUU 
                   GCUC UCCUCUC  AAUCCUU G CCC GGGUG    GU     \
                   CGAG GGGAGAG  UUAGGAA C GGG CCCAC    CG     C
ACAAGAGGUGCGUCUCCCC    U       UC^      - -   -     GUAA  UAAGU 
.       110       100        90         80          70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Star sequence

Hsa-Mir-362-P5_5p*

mirBase accession

MIMAT0002872

Sequence

0- AAUCCUUUGUCCCUGGGUGAGAGU -24

Get sequence

Proposed targets

microrna.org: MIMAT0002872
TargetScanVert: hsa-miR-501-5p
TargetMiner: hsa-miR-501-5p
miRDB: MIMAT0002872

Mature sequence

Hsa-Mir-362-P5_3p

mirBase accession

MIMAT0004774

Sequence

37- AAUGCACCCGGGCAAGGAUUCUG -60

Get sequence

Proposed targets

microrna.org: MIMAT0004774
TargetScanVert: hsa-miR-501-3p
TargetMiner: hsa-miR-501-3p
miRDB: MIMAT0004774