| MirGeneDB ID | Pab-Mir-362-P5 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AUGCACC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-362-P3a-v1 Pab-Mir-362-P3a-v2 Pab-Mir-362-P3b Pab-Mir-362-P4 Pab-Mir-362-P6 |
| Orthologues | Cja-Mir-362-P5 Cpo-Mir-362-P5 Eca-Mir-362-P5 Hsa-Mir-362-P5 Mml-Mir-362-P5 Mmr-Mir-362-P5 Mmu-Mir-362-P5 Ocu-Mir-362-P5 Rno-Mir-362-P5 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 50286109-50286167 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUGAGUCCUCUGCUCUGCUCUUCCUCUCUAAUCCUUUGUCCCUGGGUGAGAGUUCUUUCUGAAUGCAAUGCACCCAGGCAAGGAUUCCGAGAGGGUGAGCCCCCUCUGCGUGGAGAACGet precursor sequence |
| Structure | 10 20 30 40 50 CCUGAGUCCUCUGCUCU- U U-| UGUC AGA- UCUUU GCUC UCCUCUC AAUCCUU CCUGGGUG GU \ CGAG GGGAGAG UUAGGAA GGACCCAC CG C CAAGAGGUGCGUCUCCCC U CC^ C--- GUAA UAAGU 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Pab-Mir-362-P5_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AAUCCUUUGUCCCUGGGUGAGAGU -24
Get sequence
|
| Mature sequence | Pab-Mir-362-P5_3p (predicted) |
| mirBase accession | None |
| Sequence |
37- AAUGCACCCAGGCAAGGAUUCC -59
Get sequence
|
