MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-362-P5

Family name MIR-362 (all species)
Seed AUGCACC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-501
Paralogues Ocu-Mir-362-P2  Ocu-Mir-362-P3a  Ocu-Mir-362-P4  Ocu-Mir-362-P6 
Orthologues Cja-Mir-362-P5  Cpo-Mir-362-P5  Eca-Mir-362-P5  Hsa-Mir-362-P5  Mml-Mir-362-P5  Mmr-Mir-362-P5  Mmu-Mir-362-P5  Pab-Mir-362-P5  Rno-Mir-362-P5 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrX: 34238810-34238869 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P5)		 Mir-188-P1 chrX: 34232287-34232345 [+] UCSC Ensembl
Mir-188-P2 chrX: 34232654-34232713 [+] UCSC Ensembl
Mir-362-P2 chrX: 34235397-34235456 [+] UCSC Ensembl
Mir-362-P3a chrX: 34237519-34237579 [+] UCSC Ensembl
Mir-362-P4 chrX: 34238027-34238085 [+] UCSC Ensembl
Mir-362-P5 chrX: 34238810-34238869 [+] UCSC Ensembl
Mir-188-P3 chrX: 34242048-34242106 [+] UCSC Ensembl
Mir-362-P6 chrX: 34243943-34244002 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGAGCCUUCUGCUCUGCUCCCCCUCUCUAAUCCUUUGUCCCUGGGUGAGAAUGCUUUCUGAAUGCAAUGCACCCGGGCAAGGAUUCCAAGAGGGUGAGCCUGCUCUGCAUGGAGAAGG
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Structure
        10          20        30         40        50        60
UCUGAGCCUUCUGCUCU--    C      CU-|      U U   U     AGAAUGCUUU 
                   GCUC CCCUCU   AAUCCUU G CCC GGGUG          C
                   CGAG GGGAGA   UUAGGAA C GGG CCCAC          U
GGAAGAGGUACGUCUCGUC    U      ACC^      - -   -     GUAACGUAAG 
.       110       100        90         80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-362-P5_5p*
mirBase accessionMIMAT0048493
Sequence 
0- AAUCCUUUGUCCCUGGGUGAGAAU -24
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Mature sequence

Ocu-Mir-362-P5_3p
mirBase accessionMIMAT0048494
Sequence 
37- AAUGCACCCGGGCAAGGAUUCCA -60
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