MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-362-P4

Family name MIR-362 (all species)
Seed AUCCUUG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-362
Paralogues Ocu-Mir-362-P2  Ocu-Mir-362-P3a  Ocu-Mir-362-P5  Ocu-Mir-362-P6 
Orthologues Bta-Mir-362-P4  Cfa-Mir-362-P4  Cja-Mir-362-P4  Cpo-Mir-362-P4  Dno-Mir-362-P4  Eca-Mir-362-P4  Ete-Mir-362-P4  Hsa-Mir-362-P4  Laf-Mir-362-P4  Mml-Mir-362-P4  Mmr-Mir-362-P4  Mmu-Mir-362-P4  Pab-Mir-362-P4  Rno-Mir-362-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrX: 34238027-34238085 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P4)		 Mir-188-P1 chrX: 34232287-34232345 [+] UCSC Ensembl
Mir-188-P2 chrX: 34232654-34232713 [+] UCSC Ensembl
Mir-362-P2 chrX: 34235397-34235456 [+] UCSC Ensembl
Mir-362-P3a chrX: 34237519-34237579 [+] UCSC Ensembl
Mir-362-P4 chrX: 34238027-34238085 [+] UCSC Ensembl
Mir-362-P5 chrX: 34238810-34238869 [+] UCSC Ensembl
Mir-188-P3 chrX: 34242048-34242106 [+] UCSC Ensembl
Mir-362-P6 chrX: 34243943-34244002 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUGAGCCUUUUUUCUGCUCCUCCUCUCAAAUCCUUGGCACCUAGGUGUGAGUGCUGUUUCAGUGCAACACACCUAUUCAAGGAUUCAAAGAGGCUGAGCCUUGUCUACGUAUGUAAG
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Structure
        10         20        30         40        50           
GCCUGAGCCUUUUUUCU-    CU     CA-|        CACC        A-  GCUGU 
                  GCUC  CCUCU   AAUCCUUGG    UAGGUGUG  GU     \
                  CGAG  GGAGA   UUAGGAACU    AUCCACAC  CG     U
GAAUGUAUGCAUCUGUUC    UC     AAC^        U---        AA  UGACU 
       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-362-P4_5p
mirBase accessionMIMAT0048395
Sequence 
0- AAUCCUUGGCACCUAGGUGUGAGU -24
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Star sequence

Ocu-Mir-362-P4_3p*
mirBase accessionMIMAT0048396
Sequence 
37- AACACACCUAUUCAAGGAUUCA -59
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