MirGeneDB 2.1

MirGeneDB ID

Bta-Mir-362-P4

Family name MIR-362 (all species)
Seed AUGCACC
Species Cow (Bos taurus)
MiRBase ID bta-mir-502a-1
Paralogues Bta-Mir-362-P1  Bta-Mir-362-P2-v1  Bta-Mir-362-P2-v2  Bta-Mir-362-P2-v3  Bta-Mir-362-P5  Bta-Mir-362-P6 
Orthologues Cfa-Mir-362-P4  Cpo-Mir-362-P4  Dno-Mir-362-P4  Ete-Mir-362-P4  Hsa-Mir-362-P4  Mml-Mir-362-P4  Mmu-Mir-362-P4  Ocu-Mir-362-P4  Rno-Mir-362-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037357.1: 87742037-87742095 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P4)
Mir-188-P2 NC_037357.1: 87724748-87724806 [+] UCSC Ensembl
Mir-188-P1 NC_037357.1: 87725070-87725129 [+] UCSC Ensembl
Mir-362-P6 NC_037357.1: 87732068-87732125 [+] UCSC Ensembl
Mir-362-P2-v1 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P2-v3 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P2-v2 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P1 NC_037357.1: 87736674-87736732 [+] UCSC Ensembl
Mir-362-P5 NC_037357.1: 87737938-87737999 [+] UCSC Ensembl
Mir-188-P3 NC_037357.1: 87740093-87740151 [+] UCSC Ensembl
Mir-362-P4 NC_037357.1: 87742037-87742095 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUGAGCCAUCUGCCCUGCCCACCCCUCUAAUCCUUGCUCUCUGGGUGCUAGUGCUGUCUCCAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGUGGGCUGAACUGCACCAAGGACA
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Structure
        10        20         30         40        50        60 
GCUUGAGCCAUCUGCCCU        -    -|          UCU      UAG   UGUC 
                  GCCCACCC CUCU AAUCCUUGCUC   GGGUGC   UGC    \
                  CGGGUGGG GAGA UUAGGAACGGG   UCCACG   ACG    U
ACAGGAACCACGUCAAGU        A    C^          ---      UA-   UACC 
       110       100        90        80           70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Star sequence

Bta-Mir-362-P4_5p* (predicted)

mirBase accessionNone
Sequence
0- AAUCCUUGCUCUCUGGGUGCUAGUGC -26
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Mature sequence

Bta-Mir-362-P4_3p

mirBase accessionMIMAT0009338
Sequence
37- AAUGCACCUGGGCAAGGAUUCA -59
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Proposed targets TargetScanVert: bta-miR-502a