Mir-362-P1-v1

MirGeneDB ID

Bta-Mir-362-P1-v1

Family name

MIR-362 (all species)

Seed

AUGCACC

Species

Cow (Bos taurus)

MiRBase ID

bta-mir-502a-2

Paralogues

Bta-Mir-362-P1-v2 Bta-Mir-362-P3a-v1 Bta-Mir-362-P3a-v2 Bta-Mir-362-P3a-v3 Bta-Mir-362-P3b-v1 Bta-Mir-362-P3b-v2 Bta-Mir-362-P4 Bta-Mir-362-P6

Orthologues

Laf-Mir-362-P1

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)

NC_037357.1: 87732069-87732124 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P1-v1)

Mir-188-P1 NC_037357.1: 87724748-87724806 [+] UCSC Ensembl
Mir-188-P2 NC_037357.1: 87725070-87725129 [+] UCSC Ensembl
Mir-362-P1-v1 NC_037357.1: 87732069-87732124 [+] UCSC Ensembl
Mir-362-P1-v2 NC_037357.1: 87732069-87732124 [+] UCSC Ensembl
Mir-362-P3a-v3 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P3a-v2 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P3a-v1 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl
Mir-362-P4 NC_037357.1: 87736674-87736732 [+] UCSC Ensembl
Mir-362-P3b-v1 NC_037357.1: 87737938-87737999 [+] UCSC Ensembl
Mir-362-P3b-v2 NC_037357.1: 87737938-87737999 [+] UCSC Ensembl
Mir-188-P3 NC_037357.1: 87740093-87740151 [+] UCSC Ensembl
Mir-362-P6 NC_037357.1: 87742037-87742096 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUAGUUUUCUGCUCUGUUCCCCUGUAUCCAAUCUUAAUGCCCAGAUGCAGGUACUGUCUCAGUGCAAUGCACCUGGGCAAGGAUUCACAGAAGAUAAGUGUCUUCUGCACAGAGAA

Get precursor sequence

Structure

        10             20        30        40        50        
CUAGUUUUCUGCUCUGU-----| CC    AUCC      AA       A    GGUACUGU 
                      UC  CUGU    AAUCUU  UGCCCAG UGCA        C
                      AG  GACA    UUAGGA  ACGGGUC ACGU        U
AAGAGACACGUCUUCUGUGAAU^ AA    C---      --       C    AACGUGAC 
    110       100        90           80          70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Bo	Br	Ce	Co	Co	De	Fe	He	Hy	Ir	Ki	La	Lo	Mi	No	Op	Or	Pe	Re	Su	Te

Star sequence

Bta-Mir-362-P1-v1_5p* (predicted)

mirBase accession

None

Sequence

0- AUCUUAAUGCCCAGAUGCAGGU -22

Get sequence

Mature sequence

Bta-Mir-362-P1-v1_3p

mirBase accession

MIMAT0009338

Sequence

35- AAUGCACCUGGGCAAGGAUUC -56

Get sequence

Proposed targets

TargetScanVert: bta-miR-502a