| MirGeneDB ID | Bta-Mir-362-P1-v1 |
|---|---|
| Family name | MIR-362 (all species) |
| Seed | AUGCACC |
| Species | Cow (Bos taurus) |
| MiRBase ID | bta-mir-502a-2 |
| Paralogues | Bta-Mir-362-P1-v2 Bta-Mir-362-P3a-v1 Bta-Mir-362-P3a-v2 Bta-Mir-362-P3a-v3 Bta-Mir-362-P3b-v1 Bta-Mir-362-P3b-v2 Bta-Mir-362-P4 Bta-Mir-362-P6 |
| Orthologues | Laf-Mir-362-P1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037357.1: 87732069-87732124 [+] UCSC Ensembl |
| Clustered miRNAs (< 50kb from Mir-362-P1-v1) |
Mir-188-P1
NC_037357.1: 87724748-87724806 [+]
UCSC
Ensembl
Mir-188-P2 NC_037357.1: 87725070-87725129 [+] UCSC Ensembl Mir-362-P1-v1 NC_037357.1: 87732069-87732124 [+] UCSC Ensembl Mir-362-P1-v2 NC_037357.1: 87732069-87732124 [+] UCSC Ensembl Mir-362-P3a-v3 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl Mir-362-P3a-v2 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl Mir-362-P3a-v1 NC_037357.1: 87736191-87736252 [+] UCSC Ensembl Mir-362-P4 NC_037357.1: 87736674-87736732 [+] UCSC Ensembl Mir-362-P3b-v1 NC_037357.1: 87737938-87737999 [+] UCSC Ensembl Mir-362-P3b-v2 NC_037357.1: 87737938-87737999 [+] UCSC Ensembl Mir-188-P3 NC_037357.1: 87740093-87740151 [+] UCSC Ensembl Mir-362-P6 NC_037357.1: 87742037-87742096 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUAGUUUUCUGCUCUGUUCCCCUGUAUCCAAUCUUAAUGCCCAGAUGCAGGUACUGUCUCAGUGCAAUGCACCUGGGCAAGGAUUCACAGAAGAUAAGUGUCUUCUGCACAGAGAAGet precursor sequence |
| Structure | 10 20 30 40 50 CUAGUUUUCUGCUCUGU-----| CC AUCC AA A GGUACUGU UC CUGU AAUCUU UGCCCAG UGCA C AG GACA UUAGGA ACGGGUC ACGU U AAGAGACACGUCUUCUGUGAAU^ AA C--- -- C AACGUGAC 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Bta-Mir-362-P1-v1_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AUCUUAAUGCCCAGAUGCAGGU -22
Get sequence
|
| Mature sequence | Bta-Mir-362-P1-v1_3p |
| mirBase accession | MIMAT0009338 |
| Sequence |
35- AAUGCACCUGGGCAAGGAUUC -56
Get sequence
|
| Proposed targets |
TargetScanVert: bta-miR-502a |
