MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-362-P4

Family name MIR-362 (all species)
Seed AUCCUUG
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-362
Paralogues Cfa-Mir-362-P3a-v1  Cfa-Mir-362-P3a-v2  Cfa-Mir-362-P3b  Cfa-Mir-362-P6 
Orthologues Bta-Mir-362-P4  Cja-Mir-362-P4  Cpo-Mir-362-P4  Dno-Mir-362-P4  Eca-Mir-362-P4  Ete-Mir-362-P4  Hsa-Mir-362-P4  Laf-Mir-362-P4  Mml-Mir-362-P4  Mmr-Mir-362-P4  Mmu-Mir-362-P4  Ocu-Mir-362-P4  Pab-Mir-362-P4  Rno-Mir-362-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 42780369-42780427 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P4)		 Mir-188-P1 chrX: 42774680-42774738 [+] UCSC Ensembl
Mir-188-P2 chrX: 42775072-42775131 [+] UCSC Ensembl
Mir-362-P3a-v1 chrX: 42779871-42779932 [+] UCSC Ensembl
Mir-362-P3a-v2 chrX: 42779872-42779931 [+] UCSC Ensembl
Mir-362-P4 chrX: 42780369-42780427 [+] UCSC Ensembl
Mir-188-P3 chrX: 42783965-42784023 [+] UCSC Ensembl
Mir-362-P6 chrX: 42785601-42785660 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUAGCCUUCUUAUCUGCUCCCCCUCUCGAAUCCUUGGAACCUAGGUGUGAGUGCUAUUUCGGUGCAACACACCUAUUCAAGGAUUCAAAGAGGCUGAGCCUUGUCUGCAUGUAGAAG
Get precursor sequence
Structure
        10         20         30        40        50        60 
CCUUAGCCUUCUUAUCU-    CC     C-|          ACC        AG   UAUU 
                  GCUC  CCUCU  GAAUCCUUGGA   UAGGUGUG  UGC    \
                  CGAG  GGAGA  CUUAGGAACUU   AUCCACAC  ACG    U
GAAGAUGUACGUCUGUUC    UC     AA^          ---        A-   UGGC 
       110       100        90        80           70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-362-P4_5p
mirBase accessionMIMAT0009886
Sequence 
0- AAUCCUUGGAACCUAGGUGUGAGUGC -26
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Proposed targets TargetScanVert: cfa-miR-362
miRDB: MIMAT0009886
Star sequence

Cfa-Mir-362-P4_3p*
mirBase accessionNone
Sequence 
37- AACACACCUAUUCAAGGAUUCA -59
Get sequence