MirGeneDB 2.1

MirGeneDB ID

Cfa-Mir-362-P4

Family name MIR-362 (all species)
Seed AUGCACC
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-502
Paralogues Cfa-Mir-362-P1  Cfa-Mir-362-P2-v1  Cfa-Mir-362-P2-v2  Cfa-Mir-362-P5 
Orthologues Bta-Mir-362-P4  Cpo-Mir-362-P4  Dno-Mir-362-P4  Ete-Mir-362-P4  Hsa-Mir-362-P4  Mml-Mir-362-P4  Mmu-Mir-362-P4  Ocu-Mir-362-P4  Rno-Mir-362-P4 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)
chrX: 42785601-42785660 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P4)
Mir-188-P2 chrX: 42774680-42774738 [+] UCSC Ensembl
Mir-188-P1 chrX: 42775072-42775131 [+] UCSC Ensembl
Mir-362-P2-v1 chrX: 42779871-42779932 [+] UCSC Ensembl
Mir-362-P2-v2 chrX: 42779872-42779931 [+] UCSC Ensembl
Mir-362-P1 chrX: 42780369-42780427 [+] UCSC Ensembl
Mir-188-P3 chrX: 42783965-42784023 [+] UCSC Ensembl
Mir-362-P4 chrX: 42785601-42785660 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCAGCUUUCCGCGCUGCUCCCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGUCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGUGGGCUCAACUGCAUCAAGAAGAA
Get precursor sequence
Structure
        10          20        30         40        50        60 
CUUCAGCUUUCCGCGCU--    C        -|        UAU UG     UAG   UGUC 
                   GCUC CCCUCUCU AAUCCUUGC   C  GGUGC   UGC    \
                   CGGG GGGAGAGA UUAGGAACG   G  CCACG   ACG    U
AAGAAGAACUACGUCAACU    U        C^        --- GU     UA-   UAAC 
.       110       100        90        80           70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-362-P4_5p*

mirBase accessionNone
Sequence
0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26
Get sequence
Mature sequence

Cfa-Mir-362-P4_3p

mirBase accessionMIMAT0006761
Sequence
37- AAUGCACCUGGGCAAGGAUUCAG -60
Get sequence
Proposed targets TargetScanVert: cfa-miR-502
miRDB: MIMAT0006761